Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HOXA11P31270 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC20.27■□□□□ 0.84
HOXA11P31270 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
HOXA11P31270 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HOXA11P31270 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC20.27■□□□□ 0.84
HOXA11P31270 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC20.27■□□□□ 0.84
HOXA11P31270 AC011498.5-201ENST00000592027 486 ntBASIC20.27■□□□□ 0.84
HOXA11P31270 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
HOXA11P31270 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC20.27■□□□□ 0.84
HOXA11P31270 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC20.27■□□□□ 0.84
HOXA11P31270 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
HOXA11P31270 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HOXA11P31270 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
HOXA11P31270 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.27■□□□□ 0.83
HOXA11P31270 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
HOXA11P31270 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
HOXA11P31270 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.83
HOXA11P31270 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HOXA11P31270 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.26■□□□□ 0.83
HOXA11P31270 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HOXA11P31270 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HOXA11P31270 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HOXA11P31270 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HOXA11P31270 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HOXA11P31270 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.26■□□□□ 0.83
HOXA11P31270 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HOXA11P31270 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC20.26■□□□□ 0.83
HOXA11P31270 KRT18P56-201ENST00000507275 550 ntBASIC20.26■□□□□ 0.83
HOXA11P31270 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC20.26■□□□□ 0.83
HOXA11P31270 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC20.26■□□□□ 0.83
HOXA11P31270 MIR3180-4-201ENST00000582223 153 ntBASIC20.26■□□□□ 0.83
HOXA11P31270 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC20.26■□□□□ 0.83
HOXA11P31270 WDR6-223ENST00000627177 207 ntTSL 2 BASIC20.26■□□□□ 0.83
HOXA11P31270 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC20.26■□□□□ 0.83
HOXA11P31270 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
HOXA11P31270 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC20.26■□□□□ 0.83
HOXA11P31270 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
HOXA11P31270 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
HOXA11P31270 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HOXA11P31270 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HOXA11P31270 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC20.25■□□□□ 0.83
HOXA11P31270 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC20.25■□□□□ 0.83
HOXA11P31270 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HOXA11P31270 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HOXA11P31270 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC20.25■□□□□ 0.83
HOXA11P31270 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
HOXA11P31270 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC20.25■□□□□ 0.83
HOXA11P31270 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC20.25■□□□□ 0.83
HOXA11P31270 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HOXA11P31270 NPAP1P7-201ENST00000613027 823 ntBASIC20.25■□□□□ 0.83
HOXA11P31270 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC20.25■□□□□ 0.83
HOXA11P31270 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC20.25■□□□□ 0.83
HOXA11P31270 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
HOXA11P31270 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HOXA11P31270 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HOXA11P31270 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.25■□□□□ 0.83
HOXA11P31270 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.24■□□□□ 0.83
HOXA11P31270 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC20.24■□□□□ 0.83
HOXA11P31270 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
HOXA11P31270 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HOXA11P31270 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
HOXA11P31270 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
HOXA11P31270 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
HOXA11P31270 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC20.24■□□□□ 0.83
HOXA11P31270 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
HOXA11P31270 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HOXA11P31270 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HOXA11P31270 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HOXA11P31270 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HOXA11P31270 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC20.24■□□□□ 0.83
HOXA11P31270 ATP5G2P1-201ENST00000433580 426 ntBASIC20.24■□□□□ 0.83
HOXA11P31270 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
HOXA11P31270 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC20.24■□□□□ 0.83
HOXA11P31270 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC20.24■□□□□ 0.83
HOXA11P31270 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
HOXA11P31270 SPEG-225ENST00000617028 815 ntTSL 5 BASIC20.24■□□□□ 0.83
HOXA11P31270 AC083906.6-201ENST00000641366 219 ntBASIC20.24■□□□□ 0.83
HOXA11P31270 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HOXA11P31270 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.24■□□□□ 0.83
HOXA11P31270 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HOXA11P31270 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HOXA11P31270 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC20.24■□□□□ 0.83
HOXA11P31270 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HOXA11P31270 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HOXA11P31270 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HOXA11P31270 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HOXA11P31270 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HOXA11P31270 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
HOXA11P31270 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.23■□□□□ 0.83
HOXA11P31270 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HOXA11P31270 AC016734.2-201ENST00000624325 1377 ntBASIC20.23■□□□□ 0.83
HOXA11P31270 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HOXA11P31270 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HOXA11P31270 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HOXA11P31270 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
HOXA11P31270 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HOXA11P31270 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HOXA11P31270 PVRIG2P-201ENST00000435460 978 ntBASIC20.23■□□□□ 0.83
HOXA11P31270 KRT18P41-201ENST00000518924 1277 ntBASIC20.23■□□□□ 0.83
HOXA11P31270 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms