Protein–RNA interactions for Protein: P27815

PDE4A, cAMP-specific 3',5'-cyclic phosphodiesterase 4A, humanhuman

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4AP27815 AC073592.3-201ENST00000625118 1834 ntBASIC23.61■■□□□ 1.37
PDE4AP27815 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC23.61■■□□□ 1.37
PDE4AP27815 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC23.6■■□□□ 1.37
PDE4AP27815 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
PDE4AP27815 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC23.6■■□□□ 1.37
PDE4AP27815 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
PDE4AP27815 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC23.6■■□□□ 1.37
PDE4AP27815 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
PDE4AP27815 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PDE4AP27815 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC23.6■■□□□ 1.37
PDE4AP27815 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PDE4AP27815 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
PDE4AP27815 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC23.6■■□□□ 1.37
PDE4AP27815 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC23.6■■□□□ 1.37
PDE4AP27815 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
PDE4AP27815 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
PDE4AP27815 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC23.6■■□□□ 1.37
PDE4AP27815 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC23.6■■□□□ 1.37
PDE4AP27815 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC23.6■■□□□ 1.37
PDE4AP27815 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
PDE4AP27815 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC23.6■■□□□ 1.37
PDE4AP27815 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC23.6■■□□□ 1.37
PDE4AP27815 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PDE4AP27815 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
PDE4AP27815 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PDE4AP27815 AC012313.1-201ENST00000593393 3059 ntBASIC23.6■■□□□ 1.37
PDE4AP27815 GATB-213ENST00000515812 1893 ntTSL 5 BASIC23.6■■□□□ 1.37
PDE4AP27815 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PDE4AP27815 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PDE4AP27815 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
PDE4AP27815 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC23.59■■□□□ 1.37
PDE4AP27815 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PDE4AP27815 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
PDE4AP27815 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
PDE4AP27815 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC23.59■■□□□ 1.37
PDE4AP27815 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
PDE4AP27815 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC23.59■■□□□ 1.37
PDE4AP27815 ESPNP-201ENST00000270691 2015 ntBASIC23.59■■□□□ 1.37
PDE4AP27815 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PDE4AP27815 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC23.59■■□□□ 1.37
PDE4AP27815 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PDE4AP27815 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC23.59■■□□□ 1.37
PDE4AP27815 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
PDE4AP27815 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
PDE4AP27815 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC23.59■■□□□ 1.37
PDE4AP27815 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
PDE4AP27815 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PDE4AP27815 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PDE4AP27815 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
PDE4AP27815 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
PDE4AP27815 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PDE4AP27815 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
PDE4AP27815 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC23.59■■□□□ 1.37
PDE4AP27815 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
PDE4AP27815 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC23.59■■□□□ 1.37
PDE4AP27815 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
PDE4AP27815 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
PDE4AP27815 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
PDE4AP27815 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
PDE4AP27815 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
PDE4AP27815 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC23.58■■□□□ 1.37
PDE4AP27815 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
PDE4AP27815 KRASP1-201ENST00000407852 552 ntBASIC23.58■■□□□ 1.37
PDE4AP27815 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC23.58■■□□□ 1.37
PDE4AP27815 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC23.58■■□□□ 1.37
PDE4AP27815 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
PDE4AP27815 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC23.58■■□□□ 1.37
PDE4AP27815 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
PDE4AP27815 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC23.58■■□□□ 1.37
PDE4AP27815 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC23.58■■□□□ 1.37
PDE4AP27815 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
PDE4AP27815 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.37
PDE4AP27815 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC23.58■■□□□ 1.37
PDE4AP27815 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
PDE4AP27815 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
PDE4AP27815 EML3-212ENST00000494176 2901 ntTSL 2 BASIC23.58■■□□□ 1.36
PDE4AP27815 EML3-216ENST00000529309 2909 ntTSL 2 BASIC23.58■■□□□ 1.36
PDE4AP27815 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
PDE4AP27815 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC23.58■■□□□ 1.36
PDE4AP27815 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.36
PDE4AP27815 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC23.58■■□□□ 1.36
PDE4AP27815 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC23.58■■□□□ 1.36
PDE4AP27815 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC23.57■■□□□ 1.36
PDE4AP27815 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
PDE4AP27815 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
PDE4AP27815 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
PDE4AP27815 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC23.57■■□□□ 1.36
PDE4AP27815 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC23.57■■□□□ 1.36
PDE4AP27815 KRT17P3-201ENST00000420566 1262 ntBASIC23.57■■□□□ 1.36
PDE4AP27815 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
PDE4AP27815 Z85996.1-201ENST00000494644 937 ntBASIC23.57■■□□□ 1.36
PDE4AP27815 LY6E-205ENST00000519611 635 ntTSL 3 BASIC23.57■■□□□ 1.36
PDE4AP27815 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC23.57■■□□□ 1.36
PDE4AP27815 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC23.57■■□□□ 1.36
PDE4AP27815 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
PDE4AP27815 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
PDE4AP27815 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
PDE4AP27815 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC23.57■■□□□ 1.36
PDE4AP27815 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PDE4AP27815 TBCB-214ENST00000629269 413 ntTSL 5 BASIC23.57■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms