Protein–RNA interactions for Protein: P25440

BRD2, Bromodomain-containing protein 2, humanhuman

Known RBP Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD2P25440 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
BRD2P25440 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
BRD2P25440 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
BRD2P25440 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
BRD2P25440 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
BRD2P25440 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
BRD2P25440 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
BRD2P25440 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.11■□□□□ 0.81
BRD2P25440 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
BRD2P25440 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
BRD2P25440 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
BRD2P25440 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC20.11■□□□□ 0.81
BRD2P25440 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
BRD2P25440 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
BRD2P25440 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.11■□□□□ 0.81
BRD2P25440 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
BRD2P25440 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
BRD2P25440 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC20.11■□□□□ 0.81
BRD2P25440 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
BRD2P25440 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
BRD2P25440 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
BRD2P25440 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
BRD2P25440 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
BRD2P25440 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
BRD2P25440 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
BRD2P25440 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
BRD2P25440 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
BRD2P25440 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
BRD2P25440 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
BRD2P25440 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
BRD2P25440 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
BRD2P25440 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC20.1■□□□□ 0.81
BRD2P25440 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
BRD2P25440 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
BRD2P25440 CROCCP3-202ENST00000420820 1947 ntBASIC20.1■□□□□ 0.81
BRD2P25440 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.1■□□□□ 0.81
BRD2P25440 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
BRD2P25440 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
BRD2P25440 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC20.1■□□□□ 0.81
BRD2P25440 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
BRD2P25440 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
BRD2P25440 FITM1-202ENST00000559294 800 ntBASIC20.1■□□□□ 0.81
BRD2P25440 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
BRD2P25440 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
BRD2P25440 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
BRD2P25440 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
BRD2P25440 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
BRD2P25440 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC20.1■□□□□ 0.81
BRD2P25440 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
BRD2P25440 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
BRD2P25440 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
BRD2P25440 KRT8P3-201ENST00000519669 1449 ntBASIC20.1■□□□□ 0.81
BRD2P25440 KRT8P9-201ENST00000558927 1449 ntBASIC20.1■□□□□ 0.81
BRD2P25440 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
BRD2P25440 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
BRD2P25440 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
BRD2P25440 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
BRD2P25440 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC20.09■□□□□ 0.81
BRD2P25440 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.09■□□□□ 0.81
BRD2P25440 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
BRD2P25440 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.09■□□□□ 0.81
BRD2P25440 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
BRD2P25440 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
BRD2P25440 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
BRD2P25440 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
BRD2P25440 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
BRD2P25440 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
BRD2P25440 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
BRD2P25440 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
BRD2P25440 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
BRD2P25440 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
BRD2P25440 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
BRD2P25440 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.09■□□□□ 0.81
BRD2P25440 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
BRD2P25440 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.09■□□□□ 0.81
BRD2P25440 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
BRD2P25440 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
BRD2P25440 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
BRD2P25440 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
BRD2P25440 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC20.09■□□□□ 0.81
BRD2P25440 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
BRD2P25440 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
BRD2P25440 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
BRD2P25440 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
BRD2P25440 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
BRD2P25440 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
BRD2P25440 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
BRD2P25440 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.81
BRD2P25440 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC20.08■□□□□ 0.81
BRD2P25440 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
BRD2P25440 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
BRD2P25440 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
BRD2P25440 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20.08■□□□□ 0.81
BRD2P25440 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
BRD2P25440 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
BRD2P25440 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
BRD2P25440 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
BRD2P25440 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC20.08■□□□□ 0.81
BRD2P25440 AC008622.2-201ENST00000617006 1229 ntBASIC20.08■□□□□ 0.81
BRD2P25440 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC20.08■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms