Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
UBCP0CG48 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
UBCP0CG48 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.46■□□□□ 0.23
UBCP0CG48 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBCP0CG48 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBCP0CG48 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.46■□□□□ 0.23
UBCP0CG48 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBCP0CG48 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.46■□□□□ 0.23
UBCP0CG48 KRT8P41-201ENST00000533985 1514 ntBASIC16.46■□□□□ 0.23
UBCP0CG48 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBCP0CG48 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBCP0CG48 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBCP0CG48 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
UBCP0CG48 KRT17P3-201ENST00000420566 1262 ntBASIC16.46■□□□□ 0.23
UBCP0CG48 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
UBCP0CG48 GLRB-205ENST00000512619 728 ntTSL 3 BASIC16.46■□□□□ 0.23
UBCP0CG48 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC16.46■□□□□ 0.23
UBCP0CG48 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.46■□□□□ 0.23
UBCP0CG48 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBCP0CG48 KATNBL1P6-202ENST00000562413 1466 ntBASIC16.46■□□□□ 0.23
UBCP0CG48 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.46■□□□□ 0.23
UBCP0CG48 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
UBCP0CG48 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBCP0CG48 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBCP0CG48 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.46■□□□□ 0.23
UBCP0CG48 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.22
UBCP0CG48 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
UBCP0CG48 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
UBCP0CG48 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
UBCP0CG48 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
UBCP0CG48 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBCP0CG48 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBCP0CG48 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
UBCP0CG48 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
UBCP0CG48 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC16.45■□□□□ 0.22
UBCP0CG48 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBCP0CG48 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.45■□□□□ 0.22
UBCP0CG48 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.45■□□□□ 0.22
UBCP0CG48 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBCP0CG48 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBCP0CG48 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.45■□□□□ 0.22
UBCP0CG48 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.45■□□□□ 0.22
UBCP0CG48 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBCP0CG48 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBCP0CG48 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBCP0CG48 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
UBCP0CG48 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBCP0CG48 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBCP0CG48 GAS7-202ENST00000396115 929 ntTSL 5 BASIC16.45■□□□□ 0.22
UBCP0CG48 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
UBCP0CG48 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
UBCP0CG48 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC16.45■□□□□ 0.22
UBCP0CG48 AP003097.1-201ENST00000530657 1135 ntBASIC16.45■□□□□ 0.22
UBCP0CG48 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
UBCP0CG48 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC16.45■□□□□ 0.22
UBCP0CG48 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC16.45■□□□□ 0.22
UBCP0CG48 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC16.45■□□□□ 0.22
UBCP0CG48 AC069544.1-201ENST00000609399 999 ntBASIC16.45■□□□□ 0.22
UBCP0CG48 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC16.45■□□□□ 0.22
UBCP0CG48 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC16.45■□□□□ 0.22
UBCP0CG48 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC16.45■□□□□ 0.22
UBCP0CG48 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
UBCP0CG48 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBCP0CG48 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
UBCP0CG48 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBCP0CG48 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
UBCP0CG48 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBCP0CG48 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
UBCP0CG48 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.45■□□□□ 0.22
UBCP0CG48 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBCP0CG48 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.44■□□□□ 0.22
UBCP0CG48 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.44■□□□□ 0.22
UBCP0CG48 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
UBCP0CG48 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
UBCP0CG48 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
UBCP0CG48 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
UBCP0CG48 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
UBCP0CG48 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
UBCP0CG48 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
UBCP0CG48 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
UBCP0CG48 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC16.44■□□□□ 0.22
UBCP0CG48 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
UBCP0CG48 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC16.44■□□□□ 0.22
UBCP0CG48 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.44■□□□□ 0.22
UBCP0CG48 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
UBCP0CG48 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
UBCP0CG48 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
UBCP0CG48 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC16.44■□□□□ 0.22
UBCP0CG48 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
UBCP0CG48 AC008403.3-201ENST00000598924 454 ntBASIC16.44■□□□□ 0.22
UBCP0CG48 MTDHP1-201ENST00000605323 784 ntBASIC16.44■□□□□ 0.22
UBCP0CG48 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
UBCP0CG48 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
UBCP0CG48 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
UBCP0CG48 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
UBCP0CG48 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
UBCP0CG48 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
UBCP0CG48 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
UBCP0CG48 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
UBCP0CG48 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms