Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.27■□□□□ 0.36
THBS1P07996 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.27■□□□□ 0.36
THBS1P07996 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.27■□□□□ 0.36
THBS1P07996 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.27■□□□□ 0.36
THBS1P07996 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.27■□□□□ 0.36
THBS1P07996 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.27■□□□□ 0.36
THBS1P07996 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
THBS1P07996 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
THBS1P07996 AP001412.1-201ENST00000608405 714 ntBASIC17.27■□□□□ 0.36
THBS1P07996 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.27■□□□□ 0.36
THBS1P07996 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.27■□□□□ 0.36
THBS1P07996 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
THBS1P07996 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
THBS1P07996 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
THBS1P07996 KRT8P45-201ENST00000414328 1447 ntBASIC17.27■□□□□ 0.35
THBS1P07996 AC112777.1-201ENST00000540175 1423 ntBASIC17.27■□□□□ 0.35
THBS1P07996 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
THBS1P07996 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
THBS1P07996 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.27■□□□□ 0.35
THBS1P07996 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
THBS1P07996 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
THBS1P07996 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
THBS1P07996 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
THBS1P07996 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.26■□□□□ 0.35
THBS1P07996 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
THBS1P07996 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
THBS1P07996 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
THBS1P07996 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
THBS1P07996 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
THBS1P07996 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
THBS1P07996 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.26■□□□□ 0.35
THBS1P07996 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.26■□□□□ 0.35
THBS1P07996 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
THBS1P07996 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
THBS1P07996 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.26■□□□□ 0.35
THBS1P07996 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
THBS1P07996 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
THBS1P07996 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
THBS1P07996 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.26■□□□□ 0.35
THBS1P07996 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
THBS1P07996 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
THBS1P07996 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
THBS1P07996 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.26■□□□□ 0.35
THBS1P07996 AC079416.2-201ENST00000625035 1193 ntBASIC17.26■□□□□ 0.35
THBS1P07996 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
THBS1P07996 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
THBS1P07996 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
THBS1P07996 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
THBS1P07996 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.26■□□□□ 0.35
THBS1P07996 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
THBS1P07996 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.26■□□□□ 0.35
THBS1P07996 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
THBS1P07996 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.26■□□□□ 0.35
THBS1P07996 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
THBS1P07996 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
THBS1P07996 AL109659.2-201ENST00000606809 1674 ntBASIC17.26■□□□□ 0.35
THBS1P07996 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
THBS1P07996 AL357033.4-201ENST00000617703 1807 ntBASIC17.26■□□□□ 0.35
THBS1P07996 AC126763.1-201ENST00000552015 2118 ntBASIC17.26■□□□□ 0.35
THBS1P07996 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
THBS1P07996 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.25■□□□□ 0.35
THBS1P07996 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.25■□□□□ 0.35
THBS1P07996 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
THBS1P07996 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
THBS1P07996 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
THBS1P07996 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
THBS1P07996 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
THBS1P07996 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
THBS1P07996 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
THBS1P07996 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
THBS1P07996 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.25■□□□□ 0.35
THBS1P07996 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
THBS1P07996 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
THBS1P07996 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
THBS1P07996 RPS2P55-201ENST00000397318 883 ntBASIC17.25■□□□□ 0.35
THBS1P07996 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.25■□□□□ 0.35
THBS1P07996 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.25■□□□□ 0.35
THBS1P07996 AC107956.1-201ENST00000494359 873 ntBASIC17.25■□□□□ 0.35
THBS1P07996 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.25■□□□□ 0.35
THBS1P07996 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.25■□□□□ 0.35
THBS1P07996 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.25■□□□□ 0.35
THBS1P07996 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
THBS1P07996 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.25■□□□□ 0.35
THBS1P07996 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
THBS1P07996 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
THBS1P07996 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
THBS1P07996 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.25■□□□□ 0.35
THBS1P07996 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
THBS1P07996 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
THBS1P07996 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
THBS1P07996 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
THBS1P07996 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.24■□□□□ 0.35
THBS1P07996 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.24■□□□□ 0.35
THBS1P07996 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
THBS1P07996 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
THBS1P07996 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
THBS1P07996 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
THBS1P07996 AC233702.5-201ENST00000584107 538 ntBASIC17.24■□□□□ 0.35
THBS1P07996 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
THBS1P07996 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms