Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 AC005332.7-201ENST00000614046 2005 ntBASIC18.9■□□□□ 0.62
RETP07949 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
RETP07949 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.89■□□□□ 0.62
RETP07949 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
RETP07949 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.89■□□□□ 0.62
RETP07949 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.89■□□□□ 0.62
RETP07949 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
RETP07949 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.89■□□□□ 0.61
RETP07949 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
RETP07949 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.89■□□□□ 0.61
RETP07949 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RETP07949 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.89■□□□□ 0.61
RETP07949 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RETP07949 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
RETP07949 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RETP07949 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RETP07949 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.89■□□□□ 0.61
RETP07949 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
RETP07949 LINC01465-201ENST00000408887 1940 ntBASIC18.89■□□□□ 0.61
RETP07949 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RETP07949 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RETP07949 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RETP07949 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RETP07949 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
RETP07949 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RETP07949 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RETP07949 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RETP07949 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
RETP07949 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RETP07949 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RETP07949 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RETP07949 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
RETP07949 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RETP07949 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RETP07949 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RETP07949 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
RETP07949 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.88■□□□□ 0.61
RETP07949 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.88■□□□□ 0.61
RETP07949 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.88■□□□□ 0.61
RETP07949 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RETP07949 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC18.88■□□□□ 0.61
RETP07949 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.88■□□□□ 0.61
RETP07949 AP002469.2-201ENST00000531724 424 ntBASIC18.88■□□□□ 0.61
RETP07949 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.88■□□□□ 0.61
RETP07949 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.88■□□□□ 0.61
RETP07949 SLC25A6P4-201ENST00000586535 553 ntBASIC18.88■□□□□ 0.61
RETP07949 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
RETP07949 KRT8P11-201ENST00000409686 1436 ntBASIC18.88■□□□□ 0.61
RETP07949 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
RETP07949 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.88■□□□□ 0.61
RETP07949 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RETP07949 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.88■□□□□ 0.61
RETP07949 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
RETP07949 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.88■□□□□ 0.61
RETP07949 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
RETP07949 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
RETP07949 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RETP07949 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RETP07949 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.88■□□□□ 0.61
RETP07949 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
RETP07949 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
RETP07949 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RETP07949 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RETP07949 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RETP07949 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RETP07949 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RETP07949 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RETP07949 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RETP07949 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RETP07949 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RETP07949 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
RETP07949 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RETP07949 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RETP07949 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.87■□□□□ 0.61
RETP07949 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC18.87■□□□□ 0.61
RETP07949 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.87■□□□□ 0.61
RETP07949 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC18.87■□□□□ 0.61
RETP07949 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RETP07949 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RETP07949 MIR4674-201ENST00000582457 87 ntBASIC18.87■□□□□ 0.61
RETP07949 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RETP07949 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC18.87■□□□□ 0.61
RETP07949 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.87■□□□□ 0.61
RETP07949 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.87■□□□□ 0.61
RETP07949 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.87■□□□□ 0.61
RETP07949 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
RETP07949 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.86■□□□□ 0.61
RETP07949 AP000974.1-201ENST00000623909 2387 ntBASIC18.86■□□□□ 0.61
RETP07949 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RETP07949 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.86■□□□□ 0.61
RETP07949 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RETP07949 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
RETP07949 AC093525.10-201ENST00000625130 1569 ntBASIC18.86■□□□□ 0.61
RETP07949 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.86■□□□□ 0.61
RETP07949 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RETP07949 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RETP07949 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RETP07949 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.86■□□□□ 0.61
RETP07949 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RETP07949 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms