Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.77■□□□□ 0.44
CTSBP07858 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.77■□□□□ 0.44
CTSBP07858 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CTSBP07858 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.77■□□□□ 0.44
CTSBP07858 LINC01238-205ENST00000567549 1107 ntBASIC17.77■□□□□ 0.44
CTSBP07858 AC112497.1-201ENST00000624824 639 ntBASIC17.77■□□□□ 0.44
CTSBP07858 AL157888.1-201ENST00000631930 593 ntBASIC17.77■□□□□ 0.44
CTSBP07858 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
CTSBP07858 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
CTSBP07858 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.77■□□□□ 0.44
CTSBP07858 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CTSBP07858 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CTSBP07858 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CTSBP07858 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CTSBP07858 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CTSBP07858 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.77■□□□□ 0.43
CTSBP07858 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTSBP07858 AC006333.2-201ENST00000607957 2099 ntBASIC17.76■□□□□ 0.43
CTSBP07858 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CTSBP07858 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CTSBP07858 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.76■□□□□ 0.43
CTSBP07858 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTSBP07858 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CTSBP07858 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CTSBP07858 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.76■□□□□ 0.43
CTSBP07858 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CTSBP07858 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.76■□□□□ 0.43
CTSBP07858 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTSBP07858 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.76■□□□□ 0.43
CTSBP07858 KRT18P23-201ENST00000435622 1283 ntBASIC17.76■□□□□ 0.43
CTSBP07858 RASA4DP-201ENST00000460726 1199 ntBASIC17.76■□□□□ 0.43
CTSBP07858 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.76■□□□□ 0.43
CTSBP07858 FAM86EP-206ENST00000510506 987 ntBASIC17.76■□□□□ 0.43
CTSBP07858 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
CTSBP07858 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTSBP07858 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.76■□□□□ 0.43
CTSBP07858 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.76■□□□□ 0.43
CTSBP07858 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTSBP07858 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.76■□□□□ 0.43
CTSBP07858 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CTSBP07858 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTSBP07858 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
CTSBP07858 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CTSBP07858 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTSBP07858 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CTSBP07858 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.75■□□□□ 0.43
CTSBP07858 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTSBP07858 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CTSBP07858 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.75■□□□□ 0.43
CTSBP07858 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTSBP07858 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTSBP07858 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.75■□□□□ 0.43
CTSBP07858 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.75■□□□□ 0.43
CTSBP07858 AC079602.3-201ENST00000623931 403 ntBASIC17.75■□□□□ 0.43
CTSBP07858 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CTSBP07858 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CTSBP07858 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.75■□□□□ 0.43
CTSBP07858 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CTSBP07858 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTSBP07858 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.75■□□□□ 0.43
CTSBP07858 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTSBP07858 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CTSBP07858 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTSBP07858 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CTSBP07858 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CTSBP07858 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.74■□□□□ 0.43
CTSBP07858 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CTSBP07858 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CTSBP07858 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTSBP07858 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTSBP07858 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTSBP07858 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTSBP07858 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTSBP07858 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CTSBP07858 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.74■□□□□ 0.43
CTSBP07858 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CTSBP07858 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.74■□□□□ 0.43
CTSBP07858 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.74■□□□□ 0.43
CTSBP07858 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.74■□□□□ 0.43
CTSBP07858 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.74■□□□□ 0.43
CTSBP07858 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.74■□□□□ 0.43
CTSBP07858 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTSBP07858 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CTSBP07858 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CTSBP07858 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTSBP07858 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CTSBP07858 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTSBP07858 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CTSBP07858 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTSBP07858 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CTSBP07858 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.73■□□□□ 0.43
CTSBP07858 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.73■□□□□ 0.43
CTSBP07858 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.73■□□□□ 0.43
CTSBP07858 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTSBP07858 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTSBP07858 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.73■□□□□ 0.43
CTSBP07858 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTSBP07858 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.73■□□□□ 0.43
CTSBP07858 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CTSBP07858 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms