Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
COL5A2P05997 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
COL5A2P05997 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
COL5A2P05997 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC24.67■■□□□ 1.54
COL5A2P05997 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC24.67■■□□□ 1.54
COL5A2P05997 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC24.67■■□□□ 1.54
COL5A2P05997 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC24.67■■□□□ 1.54
COL5A2P05997 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC24.67■■□□□ 1.54
COL5A2P05997 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
COL5A2P05997 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
COL5A2P05997 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
COL5A2P05997 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC24.66■■□□□ 1.54
COL5A2P05997 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
COL5A2P05997 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC24.66■■□□□ 1.54
COL5A2P05997 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
COL5A2P05997 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
COL5A2P05997 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC24.66■■□□□ 1.54
COL5A2P05997 POM121L3P-201ENST00000419331 1163 ntBASIC24.66■■□□□ 1.54
COL5A2P05997 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC24.66■■□□□ 1.54
COL5A2P05997 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
COL5A2P05997 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
COL5A2P05997 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC24.66■■□□□ 1.54
COL5A2P05997 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC24.66■■□□□ 1.54
COL5A2P05997 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
COL5A2P05997 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
COL5A2P05997 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC24.66■■□□□ 1.54
COL5A2P05997 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC24.66■■□□□ 1.54
COL5A2P05997 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC24.65■■□□□ 1.54
COL5A2P05997 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
COL5A2P05997 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
COL5A2P05997 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
COL5A2P05997 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
COL5A2P05997 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
COL5A2P05997 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC24.65■■□□□ 1.54
COL5A2P05997 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC24.65■■□□□ 1.54
COL5A2P05997 AC009065.1-201ENST00000564055 1225 ntBASIC24.65■■□□□ 1.54
COL5A2P05997 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC24.65■■□□□ 1.54
COL5A2P05997 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC24.65■■□□□ 1.54
COL5A2P05997 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
COL5A2P05997 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
COL5A2P05997 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
COL5A2P05997 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC24.65■■□□□ 1.54
COL5A2P05997 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
COL5A2P05997 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
COL5A2P05997 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC24.64■■□□□ 1.54
COL5A2P05997 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC24.64■■□□□ 1.54
COL5A2P05997 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC24.64■■□□□ 1.54
COL5A2P05997 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.54
COL5A2P05997 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC24.64■■□□□ 1.54
COL5A2P05997 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC24.64■■□□□ 1.54
COL5A2P05997 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC24.64■■□□□ 1.54
COL5A2P05997 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC24.64■■□□□ 1.54
COL5A2P05997 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
COL5A2P05997 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
COL5A2P05997 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
COL5A2P05997 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
COL5A2P05997 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC24.64■■□□□ 1.54
COL5A2P05997 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC24.64■■□□□ 1.54
COL5A2P05997 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.53
COL5A2P05997 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC24.64■■□□□ 1.53
COL5A2P05997 BX842568.4-201ENST00000421222 227 ntBASIC24.64■■□□□ 1.53
COL5A2P05997 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.53
COL5A2P05997 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
COL5A2P05997 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC24.64■■□□□ 1.53
COL5A2P05997 AC011840.4-201ENST00000578471 627 ntBASIC24.64■■□□□ 1.53
COL5A2P05997 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC24.63■■□□□ 1.53
COL5A2P05997 TREX1-205ENST00000625293 1783 ntBASIC24.63■■□□□ 1.53
COL5A2P05997 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC24.63■■□□□ 1.53
COL5A2P05997 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
COL5A2P05997 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC24.63■■□□□ 1.53
COL5A2P05997 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
COL5A2P05997 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
COL5A2P05997 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
COL5A2P05997 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC24.63■■□□□ 1.53
COL5A2P05997 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
COL5A2P05997 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
COL5A2P05997 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC24.63■■□□□ 1.53
COL5A2P05997 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
COL5A2P05997 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
COL5A2P05997 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
COL5A2P05997 HES2-202ENST00000377836 507 ntTSL 2 BASIC24.63■■□□□ 1.53
COL5A2P05997 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC24.63■■□□□ 1.53
COL5A2P05997 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
COL5A2P05997 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC24.63■■□□□ 1.53
COL5A2P05997 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC24.63■■□□□ 1.53
COL5A2P05997 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
COL5A2P05997 AC005336.2-201ENST00000593183 939 ntBASIC24.63■■□□□ 1.53
COL5A2P05997 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC24.63■■□□□ 1.53
COL5A2P05997 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
COL5A2P05997 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
COL5A2P05997 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
COL5A2P05997 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC24.62■■□□□ 1.53
COL5A2P05997 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
COL5A2P05997 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC24.62■■□□□ 1.53
COL5A2P05997 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
COL5A2P05997 COX10-202ENST00000429152 875 ntTSL 2 BASIC24.62■■□□□ 1.53
COL5A2P05997 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC24.62■■□□□ 1.53
COL5A2P05997 LITAF-211ENST00000572255 516 ntTSL 4 BASIC24.62■■□□□ 1.53
COL5A2P05997 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC24.62■■□□□ 1.53
COL5A2P05997 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC24.62■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms