Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CPNE6O95741 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CPNE6O95741 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CPNE6O95741 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.4■□□□□ 0.54
CPNE6O95741 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CPNE6O95741 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CPNE6O95741 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.4■□□□□ 0.54
CPNE6O95741 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CPNE6O95741 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CPNE6O95741 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.4■□□□□ 0.54
CPNE6O95741 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.4■□□□□ 0.54
CPNE6O95741 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CPNE6O95741 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.4■□□□□ 0.54
CPNE6O95741 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.4■□□□□ 0.54
CPNE6O95741 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CPNE6O95741 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CPNE6O95741 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CPNE6O95741 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.4■□□□□ 0.54
CPNE6O95741 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CPNE6O95741 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CPNE6O95741 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CPNE6O95741 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CPNE6O95741 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CPNE6O95741 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CPNE6O95741 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CPNE6O95741 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CPNE6O95741 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CPNE6O95741 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CPNE6O95741 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CPNE6O95741 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.39■□□□□ 0.53
CPNE6O95741 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CPNE6O95741 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CPNE6O95741 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CPNE6O95741 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CPNE6O95741 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CPNE6O95741 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.39■□□□□ 0.53
CPNE6O95741 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CPNE6O95741 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CPNE6O95741 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CPNE6O95741 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.39■□□□□ 0.53
CPNE6O95741 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.39■□□□□ 0.53
CPNE6O95741 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CPNE6O95741 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.39■□□□□ 0.53
CPNE6O95741 KRT8P45-201ENST00000414328 1447 ntBASIC18.39■□□□□ 0.53
CPNE6O95741 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CPNE6O95741 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CPNE6O95741 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.38■□□□□ 0.53
CPNE6O95741 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
CPNE6O95741 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.38■□□□□ 0.53
CPNE6O95741 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CPNE6O95741 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CPNE6O95741 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
CPNE6O95741 AC104417.2-201ENST00000562989 1793 ntBASIC18.38■□□□□ 0.53
CPNE6O95741 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.38■□□□□ 0.53
CPNE6O95741 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
CPNE6O95741 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CPNE6O95741 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CPNE6O95741 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CPNE6O95741 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC18.38■□□□□ 0.53
CPNE6O95741 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CPNE6O95741 UPK3BP1-201ENST00000428678 509 ntBASIC18.38■□□□□ 0.53
CPNE6O95741 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CPNE6O95741 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.38■□□□□ 0.53
CPNE6O95741 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.38■□□□□ 0.53
CPNE6O95741 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.38■□□□□ 0.53
CPNE6O95741 AL023973.1-201ENST00000624619 620 ntBASIC18.38■□□□□ 0.53
CPNE6O95741 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CPNE6O95741 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.38■□□□□ 0.53
CPNE6O95741 AC005332.8-201ENST00000622750 2735 ntBASIC18.38■□□□□ 0.53
CPNE6O95741 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CPNE6O95741 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CPNE6O95741 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CPNE6O95741 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CPNE6O95741 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CPNE6O95741 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.38■□□□□ 0.53
CPNE6O95741 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CPNE6O95741 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.38■□□□□ 0.53
CPNE6O95741 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CPNE6O95741 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CPNE6O95741 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
CPNE6O95741 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CPNE6O95741 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CPNE6O95741 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CPNE6O95741 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CPNE6O95741 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CPNE6O95741 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CPNE6O95741 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CPNE6O95741 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CPNE6O95741 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.37■□□□□ 0.53
CPNE6O95741 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CPNE6O95741 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.37■□□□□ 0.53
CPNE6O95741 AL441883.1-201ENST00000566170 1045 ntBASIC18.37■□□□□ 0.53
CPNE6O95741 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CPNE6O95741 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.37■□□□□ 0.53
CPNE6O95741 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
CPNE6O95741 AC008622.2-201ENST00000617006 1229 ntBASIC18.37■□□□□ 0.53
CPNE6O95741 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.37■□□□□ 0.53
CPNE6O95741 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CPNE6O95741 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CPNE6O95741 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms