Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NKX2-2O95096 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
NKX2-2O95096 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
NKX2-2O95096 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NKX2-2O95096 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NKX2-2O95096 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NKX2-2O95096 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.3■□□□□ 0.36
NKX2-2O95096 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
NKX2-2O95096 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.3■□□□□ 0.36
NKX2-2O95096 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NKX2-2O95096 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NKX2-2O95096 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
NKX2-2O95096 AC007663.1-201ENST00000438948 1240 ntBASIC17.3■□□□□ 0.36
NKX2-2O95096 BX088651.1-201ENST00000540551 451 ntBASIC17.3■□□□□ 0.36
NKX2-2O95096 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.3■□□□□ 0.36
NKX2-2O95096 AC010947.1-201ENST00000623454 693 ntBASIC17.3■□□□□ 0.36
NKX2-2O95096 AC010653.2-201ENST00000623505 997 ntBASIC17.3■□□□□ 0.36
NKX2-2O95096 AL499627.1-201ENST00000569373 2188 ntBASIC17.3■□□□□ 0.36
NKX2-2O95096 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.3■□□□□ 0.36
NKX2-2O95096 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.3■□□□□ 0.36
NKX2-2O95096 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
NKX2-2O95096 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
NKX2-2O95096 CYP2D8P-201ENST00000433633 1490 ntBASIC17.3■□□□□ 0.36
NKX2-2O95096 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
NKX2-2O95096 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NKX2-2O95096 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NKX2-2O95096 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NKX2-2O95096 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NKX2-2O95096 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
NKX2-2O95096 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NKX2-2O95096 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NKX2-2O95096 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.29■□□□□ 0.36
NKX2-2O95096 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
NKX2-2O95096 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
NKX2-2O95096 AC073592.3-201ENST00000625118 1834 ntBASIC17.29■□□□□ 0.36
NKX2-2O95096 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.29■□□□□ 0.36
NKX2-2O95096 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NKX2-2O95096 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.29■□□□□ 0.36
NKX2-2O95096 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NKX2-2O95096 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NKX2-2O95096 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NKX2-2O95096 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.29■□□□□ 0.36
NKX2-2O95096 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NKX2-2O95096 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.29■□□□□ 0.36
NKX2-2O95096 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NKX2-2O95096 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.29■□□□□ 0.36
NKX2-2O95096 AC005082.1-201ENST00000413042 2259 ntBASIC17.29■□□□□ 0.36
NKX2-2O95096 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NKX2-2O95096 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.29■□□□□ 0.36
NKX2-2O95096 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.29■□□□□ 0.36
NKX2-2O95096 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.29■□□□□ 0.36
NKX2-2O95096 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NKX2-2O95096 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.29■□□□□ 0.36
NKX2-2O95096 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.29■□□□□ 0.36
NKX2-2O95096 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NKX2-2O95096 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NKX2-2O95096 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NKX2-2O95096 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.29■□□□□ 0.36
NKX2-2O95096 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
NKX2-2O95096 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NKX2-2O95096 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.28■□□□□ 0.36
NKX2-2O95096 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NKX2-2O95096 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NKX2-2O95096 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NKX2-2O95096 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
NKX2-2O95096 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NKX2-2O95096 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
NKX2-2O95096 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NKX2-2O95096 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NKX2-2O95096 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.28■□□□□ 0.36
NKX2-2O95096 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
NKX2-2O95096 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NKX2-2O95096 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NKX2-2O95096 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NKX2-2O95096 NAPSB-206ENST00000562112 1266 ntBASIC17.28■□□□□ 0.36
NKX2-2O95096 AC090164.3-201ENST00000610780 2143 ntBASIC17.28■□□□□ 0.36
NKX2-2O95096 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
NKX2-2O95096 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.28■□□□□ 0.36
NKX2-2O95096 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
NKX2-2O95096 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NKX2-2O95096 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NKX2-2O95096 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
NKX2-2O95096 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
NKX2-2O95096 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NKX2-2O95096 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
NKX2-2O95096 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NKX2-2O95096 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NKX2-2O95096 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
NKX2-2O95096 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
NKX2-2O95096 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
NKX2-2O95096 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
NKX2-2O95096 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NKX2-2O95096 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NKX2-2O95096 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
NKX2-2O95096 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NKX2-2O95096 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
NKX2-2O95096 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NKX2-2O95096 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NKX2-2O95096 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
NKX2-2O95096 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms