Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
UPK1BO75841 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
UPK1BO75841 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
UPK1BO75841 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
UPK1BO75841 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
UPK1BO75841 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
UPK1BO75841 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
UPK1BO75841 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.37■□□□□ 0.21
UPK1BO75841 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
UPK1BO75841 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
UPK1BO75841 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.36■□□□□ 0.21
UPK1BO75841 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
UPK1BO75841 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
UPK1BO75841 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
UPK1BO75841 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
UPK1BO75841 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.36■□□□□ 0.21
UPK1BO75841 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
UPK1BO75841 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.36■□□□□ 0.21
UPK1BO75841 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
UPK1BO75841 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.36■□□□□ 0.21
UPK1BO75841 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
UPK1BO75841 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
UPK1BO75841 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
UPK1BO75841 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
UPK1BO75841 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
UPK1BO75841 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
UPK1BO75841 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
UPK1BO75841 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
UPK1BO75841 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.36■□□□□ 0.21
UPK1BO75841 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.36■□□□□ 0.21
UPK1BO75841 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
UPK1BO75841 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
UPK1BO75841 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
UPK1BO75841 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.36■□□□□ 0.21
UPK1BO75841 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
UPK1BO75841 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
UPK1BO75841 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
UPK1BO75841 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
UPK1BO75841 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
UPK1BO75841 AC018553.1-201ENST00000616682 1458 ntBASIC16.35■□□□□ 0.21
UPK1BO75841 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
UPK1BO75841 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.35■□□□□ 0.21
UPK1BO75841 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
UPK1BO75841 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
UPK1BO75841 FLJ13224-201ENST00000313737 1514 ntBASIC16.35■□□□□ 0.21
UPK1BO75841 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
UPK1BO75841 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
UPK1BO75841 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
UPK1BO75841 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
UPK1BO75841 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
UPK1BO75841 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
UPK1BO75841 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
UPK1BO75841 VMO1-204ENST00000441199 741 ntTSL 2 BASIC16.35■□□□□ 0.21
UPK1BO75841 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
UPK1BO75841 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC16.35■□□□□ 0.21
UPK1BO75841 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC16.35■□□□□ 0.21
UPK1BO75841 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC16.35■□□□□ 0.21
UPK1BO75841 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
UPK1BO75841 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
UPK1BO75841 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.35■□□□□ 0.21
UPK1BO75841 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
UPK1BO75841 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
UPK1BO75841 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
UPK1BO75841 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC16.35■□□□□ 0.21
UPK1BO75841 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
UPK1BO75841 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.35■□□□□ 0.21
UPK1BO75841 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.35■□□□□ 0.21
UPK1BO75841 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UPK1BO75841 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.34■□□□□ 0.21
UPK1BO75841 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
UPK1BO75841 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UPK1BO75841 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.34■□□□□ 0.21
UPK1BO75841 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
UPK1BO75841 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
UPK1BO75841 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.34■□□□□ 0.21
UPK1BO75841 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UPK1BO75841 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UPK1BO75841 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UPK1BO75841 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC16.34■□□□□ 0.21
UPK1BO75841 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
UPK1BO75841 MIR3621-201ENST00000580529 85 ntBASIC16.34■□□□□ 0.21
UPK1BO75841 AL355001.2-201ENST00000620617 1191 ntBASIC16.34■□□□□ 0.21
UPK1BO75841 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
UPK1BO75841 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
UPK1BO75841 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
UPK1BO75841 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC16.34■□□□□ 0.21
UPK1BO75841 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
UPK1BO75841 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UPK1BO75841 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
UPK1BO75841 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
UPK1BO75841 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
UPK1BO75841 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.34■□□□□ 0.21
UPK1BO75841 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.34■□□□□ 0.21
UPK1BO75841 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UPK1BO75841 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UPK1BO75841 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UPK1BO75841 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
UPK1BO75841 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UPK1BO75841 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
UPK1BO75841 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms