Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
USH2AO75445 NUS1P2-201ENST00000417358 873 ntBASIC8.36□□□□□ -1.07
USH2AO75445 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC8.36□□□□□ -1.07
USH2AO75445 AC005829.1-201ENST00000570002 483 ntBASIC8.36□□□□□ -1.07
USH2AO75445 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC8.36□□□□□ -1.07
USH2AO75445 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC8.36□□□□□ -1.07
USH2AO75445 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
USH2AO75445 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
USH2AO75445 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
USH2AO75445 AC007967.2-201ENST00000432613 625 ntBASIC8.36□□□□□ -1.07
USH2AO75445 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC8.36□□□□□ -1.07
USH2AO75445 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC8.35□□□□□ -1.07
USH2AO75445 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
USH2AO75445 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC8.35□□□□□ -1.07
USH2AO75445 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC8.35□□□□□ -1.07
USH2AO75445 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
USH2AO75445 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC8.35□□□□□ -1.07
USH2AO75445 FP700111.2-201ENST00000619190 1892 ntBASIC8.35□□□□□ -1.07
USH2AO75445 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
USH2AO75445 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC8.35□□□□□ -1.07
USH2AO75445 RBM17P3-201ENST00000417687 1192 ntBASIC8.35□□□□□ -1.07
USH2AO75445 AC015922.1-201ENST00000421102 1152 ntBASIC8.35□□□□□ -1.07
USH2AO75445 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC8.35□□□□□ -1.07
USH2AO75445 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC8.35□□□□□ -1.07
USH2AO75445 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
USH2AO75445 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
USH2AO75445 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
USH2AO75445 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
USH2AO75445 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC8.35□□□□□ -1.07
USH2AO75445 OR7E14P-202ENST00000530490 1290 ntBASIC8.35□□□□□ -1.07
USH2AO75445 GPR32P1-201ENST00000601788 811 ntBASIC8.35□□□□□ -1.07
USH2AO75445 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC8.35□□□□□ -1.07
USH2AO75445 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
USH2AO75445 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
USH2AO75445 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC8.35□□□□□ -1.07
USH2AO75445 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
USH2AO75445 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
USH2AO75445 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
USH2AO75445 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC8.35□□□□□ -1.07
USH2AO75445 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
USH2AO75445 CD99-202ENST00000381180 530 ntTSL 2 BASIC8.35□□□□□ -1.07
USH2AO75445 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
USH2AO75445 OARD1-208ENST00000469104 704 ntTSL 2 BASIC8.35□□□□□ -1.07
USH2AO75445 AC092910.1-201ENST00000482027 1129 ntBASIC8.35□□□□□ -1.07
USH2AO75445 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
USH2AO75445 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC8.35□□□□□ -1.07
USH2AO75445 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC8.35□□□□□ -1.07
USH2AO75445 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC8.35□□□□□ -1.07
USH2AO75445 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
USH2AO75445 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC8.35□□□□□ -1.07
USH2AO75445 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
USH2AO75445 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
USH2AO75445 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
USH2AO75445 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC8.35□□□□□ -1.07
USH2AO75445 THAP5-204ENST00000438865 868 ntTSL 2 BASIC8.35□□□□□ -1.07
USH2AO75445 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC8.35□□□□□ -1.07
USH2AO75445 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
USH2AO75445 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC8.35□□□□□ -1.07
USH2AO75445 COX5A-206ENST00000568783 571 ntTSL 3 BASIC8.35□□□□□ -1.07
USH2AO75445 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC8.35□□□□□ -1.07
USH2AO75445 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
USH2AO75445 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC8.34□□□□□ -1.07
USH2AO75445 KIRREL3-AS3-201ENST00000404882 831 ntBASIC8.34□□□□□ -1.07
USH2AO75445 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC8.34□□□□□ -1.07
USH2AO75445 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC8.34□□□□□ -1.07
USH2AO75445 COX5A-204ENST00000567270 579 ntTSL 3 BASIC8.34□□□□□ -1.07
USH2AO75445 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
USH2AO75445 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC8.34□□□□□ -1.07
USH2AO75445 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC8.34□□□□□ -1.07
USH2AO75445 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.07
USH2AO75445 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
USH2AO75445 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC8.34□□□□□ -1.07
USH2AO75445 PBK-203ENST00000522944 1499 ntTSL 2 BASIC8.34□□□□□ -1.07
USH2AO75445 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
USH2AO75445 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
USH2AO75445 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
USH2AO75445 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC8.34□□□□□ -1.07
USH2AO75445 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
USH2AO75445 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
USH2AO75445 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
USH2AO75445 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC8.34□□□□□ -1.07
USH2AO75445 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC8.34□□□□□ -1.07
USH2AO75445 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC8.34□□□□□ -1.07
USH2AO75445 AC005498.2-205ENST00000593218 784 ntBASIC8.34□□□□□ -1.07
USH2AO75445 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC8.34□□□□□ -1.07
USH2AO75445 AC092902.6-201ENST00000641783 218 ntBASIC8.34□□□□□ -1.07
USH2AO75445 AC092865.6-201ENST00000642101 219 ntBASIC8.34□□□□□ -1.07
USH2AO75445 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC8.34□□□□□ -1.07
USH2AO75445 AC104417.2-201ENST00000562989 1793 ntBASIC8.34□□□□□ -1.07
USH2AO75445 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC8.34□□□□□ -1.07
USH2AO75445 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
USH2AO75445 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
USH2AO75445 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
USH2AO75445 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
USH2AO75445 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
USH2AO75445 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
USH2AO75445 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC8.34□□□□□ -1.07
USH2AO75445 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC8.34□□□□□ -1.07
USH2AO75445 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.07
USH2AO75445 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms