Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 TNXA-203ENST00000507684 2038 ntBASIC23.59■■□□□ 1.37
CACNA1FO60840 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CACNA1FO60840 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
CACNA1FO60840 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CACNA1FO60840 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CACNA1FO60840 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC23.59■■□□□ 1.37
CACNA1FO60840 CLN6-204ENST00000564752 900 ntTSL 3 BASIC23.59■■□□□ 1.37
CACNA1FO60840 CLN6-214ENST00000636314 442 ntTSL 3 BASIC23.59■■□□□ 1.37
CACNA1FO60840 MED25-212ENST00000618715 1467 ntTSL 5 BASIC23.59■■□□□ 1.37
CACNA1FO60840 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC23.59■■□□□ 1.37
CACNA1FO60840 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CACNA1FO60840 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CACNA1FO60840 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CACNA1FO60840 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
CACNA1FO60840 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC23.58■■□□□ 1.37
CACNA1FO60840 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC23.58■■□□□ 1.37
CACNA1FO60840 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CACNA1FO60840 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
CACNA1FO60840 AC069148.1-201ENST00000608741 768 ntBASIC23.58■■□□□ 1.37
CACNA1FO60840 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CACNA1FO60840 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
CACNA1FO60840 UROS-202ENST00000368778 1556 ntTSL 2 BASIC23.58■■□□□ 1.37
CACNA1FO60840 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC23.58■■□□□ 1.37
CACNA1FO60840 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
CACNA1FO60840 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC23.58■■□□□ 1.37
CACNA1FO60840 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC23.58■■□□□ 1.36
CACNA1FO60840 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC23.58■■□□□ 1.36
CACNA1FO60840 BET1L-202ENST00000332865 533 ntTSL 5 BASIC23.58■■□□□ 1.36
CACNA1FO60840 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC23.58■■□□□ 1.36
CACNA1FO60840 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC23.58■■□□□ 1.36
CACNA1FO60840 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
CACNA1FO60840 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CACNA1FO60840 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
CACNA1FO60840 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CACNA1FO60840 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC23.57■■□□□ 1.36
CACNA1FO60840 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
CACNA1FO60840 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
CACNA1FO60840 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC23.57■■□□□ 1.36
CACNA1FO60840 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC23.57■■□□□ 1.36
CACNA1FO60840 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
CACNA1FO60840 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
CACNA1FO60840 AC113404.2-201ENST00000507884 177 ntBASIC23.57■■□□□ 1.36
CACNA1FO60840 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
CACNA1FO60840 TK1-205ENST00000590862 642 ntTSL 3 BASIC23.57■■□□□ 1.36
CACNA1FO60840 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC23.57■■□□□ 1.36
CACNA1FO60840 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
CACNA1FO60840 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CACNA1FO60840 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CACNA1FO60840 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CACNA1FO60840 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC23.57■■□□□ 1.36
CACNA1FO60840 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC23.57■■□□□ 1.36
CACNA1FO60840 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC23.56■■□□□ 1.36
CACNA1FO60840 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CACNA1FO60840 AL645929.1-201ENST00000420084 975 ntBASIC23.56■■□□□ 1.36
CACNA1FO60840 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC23.56■■□□□ 1.36
CACNA1FO60840 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC23.56■■□□□ 1.36
CACNA1FO60840 AL136038.4-201ENST00000603606 1261 ntBASIC23.56■■□□□ 1.36
CACNA1FO60840 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CACNA1FO60840 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
CACNA1FO60840 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC23.56■■□□□ 1.36
CACNA1FO60840 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CACNA1FO60840 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CACNA1FO60840 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CACNA1FO60840 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC23.56■■□□□ 1.36
CACNA1FO60840 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
CACNA1FO60840 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
CACNA1FO60840 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
CACNA1FO60840 COPS8-203ENST00000409334 794 ntTSL 5 BASIC23.56■■□□□ 1.36
CACNA1FO60840 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC23.56■■□□□ 1.36
CACNA1FO60840 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CACNA1FO60840 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC23.56■■□□□ 1.36
CACNA1FO60840 AP000550.4-202ENST00000639755 178 ntBASIC23.56■■□□□ 1.36
CACNA1FO60840 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC23.56■■□□□ 1.36
CACNA1FO60840 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CACNA1FO60840 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CACNA1FO60840 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
CACNA1FO60840 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CACNA1FO60840 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CACNA1FO60840 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC23.55■■□□□ 1.36
CACNA1FO60840 MIR149-201ENST00000384879 89 ntBASIC23.55■■□□□ 1.36
CACNA1FO60840 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
CACNA1FO60840 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC23.55■■□□□ 1.36
CACNA1FO60840 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC23.55■■□□□ 1.36
CACNA1FO60840 AC093503.3-201ENST00000624917 2352 ntBASIC23.55■■□□□ 1.36
CACNA1FO60840 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CACNA1FO60840 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
CACNA1FO60840 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CACNA1FO60840 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CACNA1FO60840 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CACNA1FO60840 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CACNA1FO60840 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC23.54■■□□□ 1.36
CACNA1FO60840 AC092597.1-201ENST00000487352 616 ntBASIC23.54■■□□□ 1.36
CACNA1FO60840 FAM86EP-206ENST00000510506 987 ntBASIC23.54■■□□□ 1.36
CACNA1FO60840 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC23.54■■□□□ 1.36
CACNA1FO60840 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC23.54■■□□□ 1.36
CACNA1FO60840 GPR32P1-201ENST00000601788 811 ntBASIC23.54■■□□□ 1.36
CACNA1FO60840 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC23.54■■□□□ 1.36
CACNA1FO60840 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC23.54■■□□□ 1.36
CACNA1FO60840 SPEG-225ENST00000617028 815 ntTSL 5 BASIC23.54■■□□□ 1.36
CACNA1FO60840 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms