Protein–RNA interactions for Protein: O43861

ATP9B, Probable phospholipid-transporting ATPase IIB, humanhuman

Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP9BO43861 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
ATP9BO43861 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
ATP9BO43861 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATP9BO43861 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATP9BO43861 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.42■□□□□ 0.7
ATP9BO43861 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATP9BO43861 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19.42■□□□□ 0.7
ATP9BO43861 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.42■□□□□ 0.7
ATP9BO43861 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATP9BO43861 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.42■□□□□ 0.7
ATP9BO43861 RN7SL850P-201ENST00000579959 291 ntBASIC19.42■□□□□ 0.7
ATP9BO43861 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
ATP9BO43861 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
ATP9BO43861 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATP9BO43861 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATP9BO43861 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATP9BO43861 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATP9BO43861 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATP9BO43861 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ATP9BO43861 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.41■□□□□ 0.7
ATP9BO43861 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
ATP9BO43861 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.41■□□□□ 0.7
ATP9BO43861 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ATP9BO43861 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATP9BO43861 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ATP9BO43861 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ATP9BO43861 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.41■□□□□ 0.7
ATP9BO43861 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.41■□□□□ 0.7
ATP9BO43861 HCG11-201ENST00000411553 5696 ntBASIC19.41■□□□□ 0.7
ATP9BO43861 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.41■□□□□ 0.7
ATP9BO43861 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATP9BO43861 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATP9BO43861 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATP9BO43861 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATP9BO43861 TMPOP1-202ENST00000424642 1267 ntBASIC19.41■□□□□ 0.7
ATP9BO43861 AL137013.1-201ENST00000432946 1228 ntBASIC19.41■□□□□ 0.7
ATP9BO43861 TSPY21P-201ENST00000433481 731 ntBASIC19.41■□□□□ 0.7
ATP9BO43861 AC007663.1-201ENST00000438948 1240 ntBASIC19.41■□□□□ 0.7
ATP9BO43861 TSPY17P-201ENST00000450329 467 ntBASIC19.41■□□□□ 0.7
ATP9BO43861 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
ATP9BO43861 AC010653.2-201ENST00000623505 997 ntBASIC19.41■□□□□ 0.7
ATP9BO43861 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATP9BO43861 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ATP9BO43861 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.41■□□□□ 0.7
ATP9BO43861 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ATP9BO43861 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATP9BO43861 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATP9BO43861 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATP9BO43861 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATP9BO43861 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.41■□□□□ 0.7
ATP9BO43861 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
ATP9BO43861 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.4■□□□□ 0.7
ATP9BO43861 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATP9BO43861 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.4■□□□□ 0.7
ATP9BO43861 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ATP9BO43861 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
ATP9BO43861 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.4■□□□□ 0.7
ATP9BO43861 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.4■□□□□ 0.7
ATP9BO43861 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATP9BO43861 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATP9BO43861 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ATP9BO43861 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
ATP9BO43861 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.4■□□□□ 0.7
ATP9BO43861 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
ATP9BO43861 AL353719.1-201ENST00000566847 864 ntBASIC19.4■□□□□ 0.7
ATP9BO43861 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
ATP9BO43861 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.4■□□□□ 0.7
ATP9BO43861 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATP9BO43861 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ATP9BO43861 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.4■□□□□ 0.7
ATP9BO43861 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATP9BO43861 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.4■□□□□ 0.7
ATP9BO43861 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATP9BO43861 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATP9BO43861 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATP9BO43861 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ATP9BO43861 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATP9BO43861 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATP9BO43861 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
ATP9BO43861 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
ATP9BO43861 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
ATP9BO43861 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
ATP9BO43861 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
ATP9BO43861 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
ATP9BO43861 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.39■□□□□ 0.69
ATP9BO43861 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.39■□□□□ 0.69
ATP9BO43861 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATP9BO43861 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATP9BO43861 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ATP9BO43861 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATP9BO43861 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATP9BO43861 HMGA1P5-201ENST00000412453 271 ntBASIC19.39■□□□□ 0.69
ATP9BO43861 TSPY23P-201ENST00000440136 739 ntBASIC19.39■□□□□ 0.69
ATP9BO43861 AC010203.1-204ENST00000548782 407 ntBASIC19.39■□□□□ 0.69
ATP9BO43861 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ATP9BO43861 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ATP9BO43861 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATP9BO43861 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
ATP9BO43861 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATP9BO43861 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms