Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
ATP2A1O14983 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC21.47■■□□□ 1.03
ATP2A1O14983 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
ATP2A1O14983 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
ATP2A1O14983 POLI-202ENST00000406285 2030 ntTSL 2 BASIC21.47■■□□□ 1.03
ATP2A1O14983 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
ATP2A1O14983 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC21.47■■□□□ 1.03
ATP2A1O14983 ELP6-205ENST00000439305 880 ntTSL 2 BASIC21.47■■□□□ 1.03
ATP2A1O14983 TSSC2-201ENST00000450217 709 ntBASIC21.47■■□□□ 1.03
ATP2A1O14983 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC21.47■■□□□ 1.03
ATP2A1O14983 MIR3180-4-201ENST00000582223 153 ntBASIC21.47■■□□□ 1.03
ATP2A1O14983 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
ATP2A1O14983 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC21.47■■□□□ 1.03
ATP2A1O14983 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
ATP2A1O14983 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC21.47■■□□□ 1.03
ATP2A1O14983 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
ATP2A1O14983 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.47■■□□□ 1.03
ATP2A1O14983 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
ATP2A1O14983 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ATP2A1O14983 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ATP2A1O14983 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ATP2A1O14983 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.47■■□□□ 1.03
ATP2A1O14983 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
ATP2A1O14983 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC21.47■■□□□ 1.03
ATP2A1O14983 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
ATP2A1O14983 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ATP2A1O14983 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
ATP2A1O14983 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
ATP2A1O14983 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ATP2A1O14983 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ATP2A1O14983 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC21.46■■□□□ 1.03
ATP2A1O14983 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
ATP2A1O14983 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC21.46■■□□□ 1.03
ATP2A1O14983 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ATP2A1O14983 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ATP2A1O14983 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC21.46■■□□□ 1.03
ATP2A1O14983 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC21.46■■□□□ 1.03
ATP2A1O14983 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
ATP2A1O14983 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ATP2A1O14983 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC21.46■■□□□ 1.03
ATP2A1O14983 BX276092.5-203ENST00000456199 560 ntBASIC21.46■■□□□ 1.03
ATP2A1O14983 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
ATP2A1O14983 MIR3180-1-201ENST00000580374 94 ntBASIC21.46■■□□□ 1.03
ATP2A1O14983 MIR3180-3-201ENST00000584616 94 ntBASIC21.46■■□□□ 1.03
ATP2A1O14983 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC21.46■■□□□ 1.03
ATP2A1O14983 AC010240.3-201ENST00000607688 395 ntBASIC21.46■■□□□ 1.03
ATP2A1O14983 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC21.46■■□□□ 1.03
ATP2A1O14983 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
ATP2A1O14983 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
ATP2A1O14983 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
ATP2A1O14983 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ATP2A1O14983 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ATP2A1O14983 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ATP2A1O14983 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.46■■□□□ 1.03
ATP2A1O14983 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ATP2A1O14983 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
ATP2A1O14983 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
ATP2A1O14983 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
ATP2A1O14983 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ATP2A1O14983 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.45■■□□□ 1.02
ATP2A1O14983 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ATP2A1O14983 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ATP2A1O14983 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
ATP2A1O14983 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ATP2A1O14983 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ATP2A1O14983 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ATP2A1O14983 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC21.45■■□□□ 1.02
ATP2A1O14983 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC21.45■■□□□ 1.02
ATP2A1O14983 KRT8P26-201ENST00000534154 1276 ntBASIC21.45■■□□□ 1.02
ATP2A1O14983 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC21.45■■□□□ 1.02
ATP2A1O14983 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC21.45■■□□□ 1.02
ATP2A1O14983 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC21.45■■□□□ 1.02
ATP2A1O14983 STX6-204ENST00000542060 4809 ntTSL 2 BASIC21.45■■□□□ 1.02
ATP2A1O14983 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
ATP2A1O14983 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ATP2A1O14983 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.45■■□□□ 1.02
ATP2A1O14983 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
ATP2A1O14983 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
ATP2A1O14983 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ATP2A1O14983 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
ATP2A1O14983 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC21.44■■□□□ 1.02
ATP2A1O14983 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ATP2A1O14983 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
ATP2A1O14983 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ATP2A1O14983 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
ATP2A1O14983 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
ATP2A1O14983 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
ATP2A1O14983 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
ATP2A1O14983 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
ATP2A1O14983 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC21.44■■□□□ 1.02
ATP2A1O14983 AP002383.4-201ENST00000442518 975 ntBASIC21.44■■□□□ 1.02
ATP2A1O14983 NAA38-203ENST00000575071 553 ntTSL 2 BASIC21.44■■□□□ 1.02
ATP2A1O14983 AC092119.3-201ENST00000612618 583 ntBASIC21.44■■□□□ 1.02
ATP2A1O14983 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
ATP2A1O14983 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ATP2A1O14983 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ATP2A1O14983 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC21.44■■□□□ 1.02
ATP2A1O14983 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ATP2A1O14983 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
ATP2A1O14983 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms