Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
O00370 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
O00370 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
O00370 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
O00370 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
O00370 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
O00370 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
O00370 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
O00370 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
O00370 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
O00370 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
O00370 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
O00370 CCR12P-201ENST00000446203 998 ntBASIC19.99■□□□□ 0.79
O00370 TSPY17P-201ENST00000450329 467 ntBASIC19.99■□□□□ 0.79
O00370 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.99■□□□□ 0.79
O00370 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.99■□□□□ 0.79
O00370 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
O00370 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
O00370 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.99■□□□□ 0.79
O00370 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
O00370 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.99■□□□□ 0.79
O00370 AC116562.4-202ENST00000641738 218 ntBASIC19.99■□□□□ 0.79
O00370 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.99■□□□□ 0.79
O00370 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
O00370 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.99■□□□□ 0.79
O00370 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
O00370 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
O00370 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.99■□□□□ 0.79
O00370 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
O00370 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.98■□□□□ 0.79
O00370 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
O00370 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
O00370 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.98■□□□□ 0.79
O00370 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.98■□□□□ 0.79
O00370 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
O00370 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
O00370 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
O00370 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
O00370 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
O00370 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
O00370 AC007663.1-201ENST00000438948 1240 ntBASIC19.98■□□□□ 0.79
O00370 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.98■□□□□ 0.79
O00370 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.98■□□□□ 0.79
O00370 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.98■□□□□ 0.79
O00370 MIR4674-201ENST00000582457 87 ntBASIC19.98■□□□□ 0.79
O00370 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.98■□□□□ 0.79
O00370 AC068587.9-201ENST00000641814 219 ntBASIC19.98■□□□□ 0.79
O00370 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
O00370 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
O00370 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.98■□□□□ 0.79
O00370 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
O00370 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
O00370 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
O00370 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.98■□□□□ 0.79
O00370 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.98■□□□□ 0.79
O00370 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
O00370 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
O00370 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.98■□□□□ 0.79
O00370 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
O00370 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
O00370 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
O00370 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.98■□□□□ 0.79
O00370 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
O00370 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.97■□□□□ 0.79
O00370 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.97■□□□□ 0.79
O00370 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
O00370 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.97■□□□□ 0.79
O00370 AL138781.2-201ENST00000617896 1843 ntBASIC19.97■□□□□ 0.79
O00370 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
O00370 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.97■□□□□ 0.79
O00370 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.97■□□□□ 0.79
O00370 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
O00370 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
O00370 CRAT-202ENST00000393384 973 ntTSL 2 BASIC19.97■□□□□ 0.79
O00370 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.97■□□□□ 0.79
O00370 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
O00370 AP003041.3-201ENST00000527151 707 ntBASIC19.97■□□□□ 0.79
O00370 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
O00370 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.97■□□□□ 0.79
O00370 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
O00370 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.97■□□□□ 0.79
O00370 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.97■□□□□ 0.79
O00370 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
O00370 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
O00370 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.97■□□□□ 0.79
O00370 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
O00370 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
O00370 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.97■□□□□ 0.79
O00370 GPAT2P1-201ENST00000444924 1672 ntBASIC19.97■□□□□ 0.79
O00370 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
O00370 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
O00370 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.96■□□□□ 0.79
O00370 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
O00370 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.96■□□□□ 0.79
O00370 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.96■□□□□ 0.79
O00370 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
O00370 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
O00370 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
O00370 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
O00370 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms