Protein–RNA interactions for Protein: O00358

FOXE1, Forkhead box protein E1, humanhuman

Predicted RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXE1O00358 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
FOXE1O00358 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
FOXE1O00358 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
FOXE1O00358 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
FOXE1O00358 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
FOXE1O00358 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
FOXE1O00358 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
FOXE1O00358 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
FOXE1O00358 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.89■□□□□ 0.45
FOXE1O00358 MIR564-202ENST00000385049 94 ntBASIC17.89■□□□□ 0.45
FOXE1O00358 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.89■□□□□ 0.45
FOXE1O00358 SLC25A1P2-201ENST00000430693 912 ntBASIC17.89■□□□□ 0.45
FOXE1O00358 MCCD1P1-208ENST00000445732 328 ntBASIC17.89■□□□□ 0.45
FOXE1O00358 FITM1-202ENST00000559294 800 ntBASIC17.89■□□□□ 0.45
FOXE1O00358 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.89■□□□□ 0.45
FOXE1O00358 AL023803.3-201ENST00000615559 522 ntBASIC17.89■□□□□ 0.45
FOXE1O00358 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
FOXE1O00358 GPAT2P1-201ENST00000444924 1672 ntBASIC17.89■□□□□ 0.45
FOXE1O00358 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
FOXE1O00358 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
FOXE1O00358 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
FOXE1O00358 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.89■□□□□ 0.45
FOXE1O00358 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
FOXE1O00358 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
FOXE1O00358 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
FOXE1O00358 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
FOXE1O00358 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
FOXE1O00358 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.89■□□□□ 0.45
FOXE1O00358 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
FOXE1O00358 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
FOXE1O00358 AC104581.1-202ENST00000635932 2618 ntBASIC17.88■□□□□ 0.45
FOXE1O00358 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
FOXE1O00358 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.88■□□□□ 0.45
FOXE1O00358 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
FOXE1O00358 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.88■□□□□ 0.45
FOXE1O00358 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
FOXE1O00358 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
FOXE1O00358 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
FOXE1O00358 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
FOXE1O00358 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
FOXE1O00358 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
FOXE1O00358 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.88■□□□□ 0.45
FOXE1O00358 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
FOXE1O00358 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
FOXE1O00358 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
FOXE1O00358 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
FOXE1O00358 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
FOXE1O00358 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
FOXE1O00358 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
FOXE1O00358 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.88■□□□□ 0.45
FOXE1O00358 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
FOXE1O00358 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
FOXE1O00358 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
FOXE1O00358 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
FOXE1O00358 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.88■□□□□ 0.45
FOXE1O00358 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
FOXE1O00358 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
FOXE1O00358 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
FOXE1O00358 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
FOXE1O00358 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
FOXE1O00358 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.88■□□□□ 0.45
FOXE1O00358 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.88■□□□□ 0.45
FOXE1O00358 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
FOXE1O00358 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
FOXE1O00358 AC079598.2-202ENST00000546624 1451 ntBASIC17.88■□□□□ 0.45
FOXE1O00358 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
FOXE1O00358 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
FOXE1O00358 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
FOXE1O00358 AC126763.1-201ENST00000552015 2118 ntBASIC17.87■□□□□ 0.45
FOXE1O00358 AL499627.1-201ENST00000569373 2188 ntBASIC17.87■□□□□ 0.45
FOXE1O00358 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
FOXE1O00358 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
FOXE1O00358 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
FOXE1O00358 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
FOXE1O00358 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
FOXE1O00358 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
FOXE1O00358 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
FOXE1O00358 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.87■□□□□ 0.45
FOXE1O00358 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
FOXE1O00358 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.87■□□□□ 0.45
FOXE1O00358 TSPY17P-201ENST00000450329 467 ntBASIC17.87■□□□□ 0.45
FOXE1O00358 SNORA78-201ENST00000459373 127 ntBASIC17.87■□□□□ 0.45
FOXE1O00358 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
FOXE1O00358 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.87■□□□□ 0.45
FOXE1O00358 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.87■□□□□ 0.45
FOXE1O00358 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
FOXE1O00358 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
FOXE1O00358 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
FOXE1O00358 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
FOXE1O00358 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
FOXE1O00358 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
FOXE1O00358 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
FOXE1O00358 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
FOXE1O00358 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
FOXE1O00358 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
FOXE1O00358 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
FOXE1O00358 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.86■□□□□ 0.45
FOXE1O00358 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
FOXE1O00358 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
FOXE1O00358 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms