Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.97■□□□□ 0.63
AP3B1O00203 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
AP3B1O00203 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
AP3B1O00203 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
AP3B1O00203 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.97■□□□□ 0.63
AP3B1O00203 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.97■□□□□ 0.63
AP3B1O00203 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
AP3B1O00203 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.97■□□□□ 0.63
AP3B1O00203 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
AP3B1O00203 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.97■□□□□ 0.63
AP3B1O00203 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
AP3B1O00203 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.96■□□□□ 0.63
AP3B1O00203 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
AP3B1O00203 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.96■□□□□ 0.63
AP3B1O00203 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.96■□□□□ 0.63
AP3B1O00203 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
AP3B1O00203 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
AP3B1O00203 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
AP3B1O00203 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
AP3B1O00203 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.96■□□□□ 0.63
AP3B1O00203 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
AP3B1O00203 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.96■□□□□ 0.63
AP3B1O00203 AC008040.2-201ENST00000461049 708 ntBASIC18.96■□□□□ 0.63
AP3B1O00203 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.96■□□□□ 0.63
AP3B1O00203 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.96■□□□□ 0.63
AP3B1O00203 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18.96■□□□□ 0.63
AP3B1O00203 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.96■□□□□ 0.63
AP3B1O00203 AC142381.4-202ENST00000563973 229 ntBASIC18.96■□□□□ 0.63
AP3B1O00203 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.96■□□□□ 0.63
AP3B1O00203 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
AP3B1O00203 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
AP3B1O00203 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.96■□□□□ 0.63
AP3B1O00203 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
AP3B1O00203 AC009113.1-201ENST00000570267 2443 ntBASIC18.96■□□□□ 0.63
AP3B1O00203 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.96■□□□□ 0.63
AP3B1O00203 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
AP3B1O00203 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
AP3B1O00203 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
AP3B1O00203 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
AP3B1O00203 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.96■□□□□ 0.63
AP3B1O00203 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.95■□□□□ 0.62
AP3B1O00203 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
AP3B1O00203 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.95■□□□□ 0.62
AP3B1O00203 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
AP3B1O00203 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
AP3B1O00203 AC096733.2-201ENST00000609937 1394 ntBASIC18.95■□□□□ 0.62
AP3B1O00203 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
AP3B1O00203 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
AP3B1O00203 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.95■□□□□ 0.62
AP3B1O00203 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
AP3B1O00203 AL162741.1-201ENST00000565563 1558 ntBASIC18.95■□□□□ 0.62
AP3B1O00203 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
AP3B1O00203 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
AP3B1O00203 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.95■□□□□ 0.62
AP3B1O00203 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
AP3B1O00203 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
AP3B1O00203 FAM197Y1-201ENST00000421178 764 ntBASIC18.95■□□□□ 0.62
AP3B1O00203 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.95■□□□□ 0.62
AP3B1O00203 TSPY20P-201ENST00000450910 630 ntBASIC18.95■□□□□ 0.62
AP3B1O00203 AC116562.2-201ENST00000507042 360 ntBASIC18.95■□□□□ 0.62
AP3B1O00203 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.95■□□□□ 0.62
AP3B1O00203 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.95■□□□□ 0.62
AP3B1O00203 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.95■□□□□ 0.62
AP3B1O00203 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
AP3B1O00203 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
AP3B1O00203 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
AP3B1O00203 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.95■□□□□ 0.62
AP3B1O00203 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
AP3B1O00203 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
AP3B1O00203 AL109659.2-201ENST00000606809 1674 ntBASIC18.95■□□□□ 0.62
AP3B1O00203 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
AP3B1O00203 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
AP3B1O00203 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
AP3B1O00203 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
AP3B1O00203 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
AP3B1O00203 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
AP3B1O00203 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
AP3B1O00203 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
AP3B1O00203 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
AP3B1O00203 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
AP3B1O00203 KRT8P45-201ENST00000414328 1447 ntBASIC18.94■□□□□ 0.62
AP3B1O00203 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
AP3B1O00203 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
AP3B1O00203 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
AP3B1O00203 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
AP3B1O00203 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.94■□□□□ 0.62
AP3B1O00203 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.94■□□□□ 0.62
AP3B1O00203 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
AP3B1O00203 AC012618.2-201ENST00000428058 849 ntBASIC18.94■□□□□ 0.62
AP3B1O00203 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.94■□□□□ 0.62
AP3B1O00203 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
AP3B1O00203 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.94■□□□□ 0.62
AP3B1O00203 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
AP3B1O00203 AC135050.7-201ENST00000624508 2218 ntBASIC18.94■□□□□ 0.62
AP3B1O00203 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
AP3B1O00203 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
AP3B1O00203 RCC2P3-201ENST00000418112 1537 ntBASIC18.94■□□□□ 0.62
AP3B1O00203 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.94■□□□□ 0.62
AP3B1O00203 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
AP3B1O00203 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms