Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
DDX39AO00148 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
DDX39AO00148 AL109659.2-201ENST00000606809 1674 ntBASIC21.09■□□□□ 0.97
DDX39AO00148 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
DDX39AO00148 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
DDX39AO00148 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC21.09■□□□□ 0.97
DDX39AO00148 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC21.09■□□□□ 0.97
DDX39AO00148 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC21.09■□□□□ 0.97
DDX39AO00148 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC21.09■□□□□ 0.97
DDX39AO00148 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC21.09■□□□□ 0.97
DDX39AO00148 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
DDX39AO00148 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
DDX39AO00148 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC21.09■□□□□ 0.97
DDX39AO00148 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
DDX39AO00148 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
DDX39AO00148 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC21.09■□□□□ 0.97
DDX39AO00148 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC21.09■□□□□ 0.97
DDX39AO00148 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
DDX39AO00148 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
DDX39AO00148 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
DDX39AO00148 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
DDX39AO00148 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC21.09■□□□□ 0.97
DDX39AO00148 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
DDX39AO00148 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
DDX39AO00148 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
DDX39AO00148 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
DDX39AO00148 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC21.08■□□□□ 0.97
DDX39AO00148 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
DDX39AO00148 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
DDX39AO00148 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
DDX39AO00148 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
DDX39AO00148 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
DDX39AO00148 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
DDX39AO00148 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.08■□□□□ 0.97
DDX39AO00148 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
DDX39AO00148 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
DDX39AO00148 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
DDX39AO00148 SAPCD2P2-201ENST00000431719 1174 ntBASIC21.08■□□□□ 0.97
DDX39AO00148 SNX5-210ENST00000481323 562 ntTSL 3 BASIC21.08■□□□□ 0.97
DDX39AO00148 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC21.08■□□□□ 0.97
DDX39AO00148 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC21.08■□□□□ 0.97
DDX39AO00148 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC21.08■□□□□ 0.97
DDX39AO00148 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC21.08■□□□□ 0.97
DDX39AO00148 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
DDX39AO00148 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
DDX39AO00148 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
DDX39AO00148 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
DDX39AO00148 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
DDX39AO00148 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
DDX39AO00148 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.96
DDX39AO00148 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
DDX39AO00148 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
DDX39AO00148 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
DDX39AO00148 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC21.07■□□□□ 0.96
DDX39AO00148 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
DDX39AO00148 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
DDX39AO00148 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC21.07■□□□□ 0.96
DDX39AO00148 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
DDX39AO00148 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
DDX39AO00148 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC21.07■□□□□ 0.96
DDX39AO00148 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
DDX39AO00148 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
DDX39AO00148 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC21.07■□□□□ 0.96
DDX39AO00148 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
DDX39AO00148 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC21.07■□□□□ 0.96
DDX39AO00148 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC21.07■□□□□ 0.96
DDX39AO00148 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC21.07■□□□□ 0.96
DDX39AO00148 SPDYE15P-201ENST00000424157 909 ntBASIC21.07■□□□□ 0.96
DDX39AO00148 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC21.07■□□□□ 0.96
DDX39AO00148 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC21.07■□□□□ 0.96
DDX39AO00148 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
DDX39AO00148 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC21.07■□□□□ 0.96
DDX39AO00148 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
DDX39AO00148 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC21.07■□□□□ 0.96
DDX39AO00148 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC21.07■□□□□ 0.96
DDX39AO00148 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
DDX39AO00148 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
DDX39AO00148 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
DDX39AO00148 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
DDX39AO00148 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
DDX39AO00148 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
DDX39AO00148 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
DDX39AO00148 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
DDX39AO00148 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
DDX39AO00148 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
DDX39AO00148 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
DDX39AO00148 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
DDX39AO00148 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
DDX39AO00148 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC21.06■□□□□ 0.96
DDX39AO00148 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC21.06■□□□□ 0.96
DDX39AO00148 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
DDX39AO00148 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
DDX39AO00148 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
DDX39AO00148 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
DDX39AO00148 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
DDX39AO00148 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
DDX39AO00148 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC21.06■□□□□ 0.96
DDX39AO00148 HOMER2P1-201ENST00000455653 964 ntBASIC21.06■□□□□ 0.96
DDX39AO00148 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
DDX39AO00148 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms