Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
TRIM49D1C9J1S8 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM49D1C9J1S8 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.82■□□□□ 0.6
TRIM49D1C9J1S8 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
TRIM49D1C9J1S8 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.82■□□□□ 0.6
TRIM49D1C9J1S8 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.82■□□□□ 0.6
TRIM49D1C9J1S8 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.82■□□□□ 0.6
TRIM49D1C9J1S8 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.82■□□□□ 0.6
TRIM49D1C9J1S8 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.82■□□□□ 0.6
TRIM49D1C9J1S8 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.82■□□□□ 0.6
TRIM49D1C9J1S8 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM49D1C9J1S8 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.82■□□□□ 0.6
TRIM49D1C9J1S8 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM49D1C9J1S8 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM49D1C9J1S8 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
TRIM49D1C9J1S8 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM49D1C9J1S8 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM49D1C9J1S8 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.82■□□□□ 0.6
TRIM49D1C9J1S8 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.82■□□□□ 0.6
TRIM49D1C9J1S8 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM49D1C9J1S8 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.82■□□□□ 0.6
TRIM49D1C9J1S8 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
TRIM49D1C9J1S8 LTB4R2-202ENST00000528054 3092 ntBASIC18.82■□□□□ 0.6
TRIM49D1C9J1S8 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM49D1C9J1S8 HTR7P1-202ENST00000624664 4411 ntBASIC18.82■□□□□ 0.6
TRIM49D1C9J1S8 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM49D1C9J1S8 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.81■□□□□ 0.6
TRIM49D1C9J1S8 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM49D1C9J1S8 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM49D1C9J1S8 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM49D1C9J1S8 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.81■□□□□ 0.6
TRIM49D1C9J1S8 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.81■□□□□ 0.6
TRIM49D1C9J1S8 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM49D1C9J1S8 AC069152.1-201ENST00000438030 544 ntBASIC18.81■□□□□ 0.6
TRIM49D1C9J1S8 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM49D1C9J1S8 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.81■□□□□ 0.6
TRIM49D1C9J1S8 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.81■□□□□ 0.6
TRIM49D1C9J1S8 AC133041.1-202ENST00000642053 222 ntBASIC18.81■□□□□ 0.6
TRIM49D1C9J1S8 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM49D1C9J1S8 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM49D1C9J1S8 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM49D1C9J1S8 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM49D1C9J1S8 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM49D1C9J1S8 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM49D1C9J1S8 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM49D1C9J1S8 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM49D1C9J1S8 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
TRIM49D1C9J1S8 BCL2-203ENST00000589955 5011 ntBASIC18.8■□□□□ 0.6
TRIM49D1C9J1S8 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.8■□□□□ 0.6
TRIM49D1C9J1S8 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.8■□□□□ 0.6
TRIM49D1C9J1S8 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM49D1C9J1S8 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM49D1C9J1S8 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM49D1C9J1S8 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM49D1C9J1S8 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.8■□□□□ 0.6
TRIM49D1C9J1S8 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM49D1C9J1S8 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
TRIM49D1C9J1S8 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM49D1C9J1S8 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
TRIM49D1C9J1S8 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.8■□□□□ 0.6
TRIM49D1C9J1S8 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM49D1C9J1S8 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.8■□□□□ 0.6
TRIM49D1C9J1S8 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.8■□□□□ 0.6
TRIM49D1C9J1S8 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
TRIM49D1C9J1S8 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.8■□□□□ 0.6
TRIM49D1C9J1S8 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
TRIM49D1C9J1S8 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.8■□□□□ 0.6
TRIM49D1C9J1S8 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.8■□□□□ 0.6
TRIM49D1C9J1S8 AC004264.1-201ENST00000608354 794 ntBASIC18.8■□□□□ 0.6
TRIM49D1C9J1S8 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
TRIM49D1C9J1S8 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.8■□□□□ 0.6
TRIM49D1C9J1S8 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.8■□□□□ 0.6
TRIM49D1C9J1S8 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM49D1C9J1S8 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM49D1C9J1S8 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM49D1C9J1S8 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.8■□□□□ 0.6
TRIM49D1C9J1S8 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM49D1C9J1S8 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.8■□□□□ 0.6
TRIM49D1C9J1S8 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM49D1C9J1S8 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
TRIM49D1C9J1S8 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.8■□□□□ 0.6
TRIM49D1C9J1S8 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.8■□□□□ 0.6
TRIM49D1C9J1S8 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM49D1C9J1S8 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.8■□□□□ 0.6
TRIM49D1C9J1S8 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM49D1C9J1S8 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.79■□□□□ 0.6
TRIM49D1C9J1S8 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.79■□□□□ 0.6
TRIM49D1C9J1S8 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
TRIM49D1C9J1S8 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM49D1C9J1S8 AP000997.3-201ENST00000623333 2250 ntBASIC18.79■□□□□ 0.6
TRIM49D1C9J1S8 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM49D1C9J1S8 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.79■□□□□ 0.6
TRIM49D1C9J1S8 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM49D1C9J1S8 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
TRIM49D1C9J1S8 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.79■□□□□ 0.6
TRIM49D1C9J1S8 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM49D1C9J1S8 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.79■□□□□ 0.6
TRIM49D1C9J1S8 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.79■□□□□ 0.6
TRIM49D1C9J1S8 AC068587.9-201ENST00000641814 219 ntBASIC18.79■□□□□ 0.6
TRIM49D1C9J1S8 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms