Protein–RNA interactions for Protein: B4E171

Tetraspanin, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B4E171 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
B4E171 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.63■□□□□ 0.41
B4E171 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.63■□□□□ 0.41
B4E171 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
B4E171 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
B4E171 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
B4E171 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
B4E171 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
B4E171 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.63■□□□□ 0.41
B4E171 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
B4E171 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
B4E171 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC17.62■□□□□ 0.41
B4E171 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
B4E171 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
B4E171 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.62■□□□□ 0.41
B4E171 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
B4E171 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
B4E171 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
B4E171 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC17.62■□□□□ 0.41
B4E171 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
B4E171 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
B4E171 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
B4E171 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
B4E171 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.62■□□□□ 0.41
B4E171 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.62■□□□□ 0.41
B4E171 AL845331.1-201ENST00000424978 1190 ntBASIC17.62■□□□□ 0.41
B4E171 UNC93B7-201ENST00000509439 705 ntBASIC17.62■□□□□ 0.41
B4E171 AP000867.3-201ENST00000524675 377 ntBASIC17.62■□□□□ 0.41
B4E171 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.62■□□□□ 0.41
B4E171 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.62■□□□□ 0.41
B4E171 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
B4E171 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
B4E171 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.62■□□□□ 0.41
B4E171 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.62■□□□□ 0.41
B4E171 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
B4E171 AL121772.3-201ENST00000610840 674 ntBASIC17.62■□□□□ 0.41
B4E171 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
B4E171 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
B4E171 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
B4E171 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.62■□□□□ 0.41
B4E171 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC17.62■□□□□ 0.41
B4E171 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
B4E171 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
B4E171 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
B4E171 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.62■□□□□ 0.41
B4E171 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.62■□□□□ 0.41
B4E171 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.61■□□□□ 0.41
B4E171 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.61■□□□□ 0.41
B4E171 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.61■□□□□ 0.41
B4E171 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
B4E171 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.61■□□□□ 0.41
B4E171 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
B4E171 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.61■□□□□ 0.41
B4E171 KRT17P6-201ENST00000453795 1220 ntBASIC17.61■□□□□ 0.41
B4E171 TOB2P1-201ENST00000469761 992 ntBASIC17.61■□□□□ 0.41
B4E171 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.61■□□□□ 0.41
B4E171 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.61■□□□□ 0.41
B4E171 GPR32P1-201ENST00000601788 811 ntBASIC17.61■□□□□ 0.41
B4E171 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
B4E171 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
B4E171 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
B4E171 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
B4E171 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
B4E171 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
B4E171 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
B4E171 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
B4E171 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
B4E171 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
B4E171 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
B4E171 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
B4E171 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.6■□□□□ 0.41
B4E171 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
B4E171 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
B4E171 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
B4E171 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
B4E171 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
B4E171 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.6■□□□□ 0.41
B4E171 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
B4E171 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
B4E171 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
B4E171 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.6■□□□□ 0.41
B4E171 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.6■□□□□ 0.41
B4E171 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.6■□□□□ 0.41
B4E171 AC024563.2-201ENST00000603282 481 ntBASIC17.6■□□□□ 0.41
B4E171 IFNL4P1-201ENST00000607083 540 ntBASIC17.6■□□□□ 0.41
B4E171 IGHV3-41-201ENST00000613121 348 ntBASIC17.6■□□□□ 0.41
B4E171 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
B4E171 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
B4E171 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.6■□□□□ 0.41
B4E171 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
B4E171 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
B4E171 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
B4E171 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
B4E171 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
B4E171 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
B4E171 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
B4E171 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
B4E171 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
B4E171 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.6■□□□□ 0.41
B4E171 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms