Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC21.78■■□□□ 1.08
TMEM88BA6NKF7 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC21.78■■□□□ 1.08
TMEM88BA6NKF7 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.78■■□□□ 1.08
TMEM88BA6NKF7 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.78■■□□□ 1.08
TMEM88BA6NKF7 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
TMEM88BA6NKF7 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.77■■□□□ 1.08
TMEM88BA6NKF7 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.77■■□□□ 1.08
TMEM88BA6NKF7 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC21.77■■□□□ 1.08
TMEM88BA6NKF7 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TMEM88BA6NKF7 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC21.77■■□□□ 1.08
TMEM88BA6NKF7 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TMEM88BA6NKF7 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TMEM88BA6NKF7 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TMEM88BA6NKF7 MIR770-201ENST00000390219 98 ntBASIC21.77■■□□□ 1.08
TMEM88BA6NKF7 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC21.77■■□□□ 1.08
TMEM88BA6NKF7 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
TMEM88BA6NKF7 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC21.77■■□□□ 1.08
TMEM88BA6NKF7 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC21.77■■□□□ 1.08
TMEM88BA6NKF7 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC21.77■■□□□ 1.08
TMEM88BA6NKF7 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC21.77■■□□□ 1.08
TMEM88BA6NKF7 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC21.77■■□□□ 1.08
TMEM88BA6NKF7 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC21.77■■□□□ 1.08
TMEM88BA6NKF7 PNMT-203ENST00000581428 677 ntTSL 2 BASIC21.77■■□□□ 1.08
TMEM88BA6NKF7 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC21.77■■□□□ 1.08
TMEM88BA6NKF7 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
TMEM88BA6NKF7 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC21.77■■□□□ 1.08
TMEM88BA6NKF7 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.77■■□□□ 1.08
TMEM88BA6NKF7 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TMEM88BA6NKF7 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21.77■■□□□ 1.08
TMEM88BA6NKF7 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
TMEM88BA6NKF7 RCC2P3-201ENST00000418112 1537 ntBASIC21.76■■□□□ 1.07
TMEM88BA6NKF7 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
TMEM88BA6NKF7 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TMEM88BA6NKF7 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
TMEM88BA6NKF7 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TMEM88BA6NKF7 INIP-202ENST00000374236 874 ntTSL 2 BASIC21.76■■□□□ 1.07
TMEM88BA6NKF7 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC21.76■■□□□ 1.07
TMEM88BA6NKF7 UNC93B6-202ENST00000528242 690 ntBASIC21.76■■□□□ 1.07
TMEM88BA6NKF7 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC21.76■■□□□ 1.07
TMEM88BA6NKF7 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC21.76■■□□□ 1.07
TMEM88BA6NKF7 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC21.76■■□□□ 1.07
TMEM88BA6NKF7 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TMEM88BA6NKF7 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TMEM88BA6NKF7 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
TMEM88BA6NKF7 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
TMEM88BA6NKF7 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
TMEM88BA6NKF7 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC21.75■■□□□ 1.07
TMEM88BA6NKF7 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TMEM88BA6NKF7 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TMEM88BA6NKF7 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TMEM88BA6NKF7 BEX3-201ENST00000361298 921 ntTSL 2 BASIC21.75■■□□□ 1.07
TMEM88BA6NKF7 ENSA-205ENST00000361532 792 ntTSL 2 BASIC21.75■■□□□ 1.07
TMEM88BA6NKF7 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC21.75■■□□□ 1.07
TMEM88BA6NKF7 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC21.75■■□□□ 1.07
TMEM88BA6NKF7 RAB17-203ENST00000409576 466 ntTSL 3 BASIC21.75■■□□□ 1.07
TMEM88BA6NKF7 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC21.75■■□□□ 1.07
TMEM88BA6NKF7 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TMEM88BA6NKF7 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC21.75■■□□□ 1.07
TMEM88BA6NKF7 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC21.75■■□□□ 1.07
TMEM88BA6NKF7 REEP1-209ENST00000541910 969 ntTSL 2 BASIC21.75■■□□□ 1.07
TMEM88BA6NKF7 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC21.75■■□□□ 1.07
TMEM88BA6NKF7 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
TMEM88BA6NKF7 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC21.75■■□□□ 1.07
TMEM88BA6NKF7 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TMEM88BA6NKF7 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TMEM88BA6NKF7 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TMEM88BA6NKF7 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
TMEM88BA6NKF7 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TMEM88BA6NKF7 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
TMEM88BA6NKF7 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TMEM88BA6NKF7 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TMEM88BA6NKF7 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TMEM88BA6NKF7 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
TMEM88BA6NKF7 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.74■■□□□ 1.07
TMEM88BA6NKF7 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TMEM88BA6NKF7 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TMEM88BA6NKF7 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
TMEM88BA6NKF7 PNMT-202ENST00000394246 821 ntTSL 2 BASIC21.74■■□□□ 1.07
TMEM88BA6NKF7 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC21.74■■□□□ 1.07
TMEM88BA6NKF7 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC21.74■■□□□ 1.07
TMEM88BA6NKF7 CFL1-202ENST00000524553 860 ntTSL 2 BASIC21.74■■□□□ 1.07
TMEM88BA6NKF7 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC21.74■■□□□ 1.07
TMEM88BA6NKF7 AC008735.5-201ENST00000623544 497 ntBASIC21.74■■□□□ 1.07
TMEM88BA6NKF7 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC21.74■■□□□ 1.07
TMEM88BA6NKF7 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
TMEM88BA6NKF7 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
TMEM88BA6NKF7 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
TMEM88BA6NKF7 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC21.73■■□□□ 1.07
TMEM88BA6NKF7 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TMEM88BA6NKF7 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
TMEM88BA6NKF7 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC21.73■■□□□ 1.07
TMEM88BA6NKF7 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC21.73■■□□□ 1.07
TMEM88BA6NKF7 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC21.73■■□□□ 1.07
TMEM88BA6NKF7 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC21.73■■□□□ 1.07
TMEM88BA6NKF7 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC21.73■■□□□ 1.07
TMEM88BA6NKF7 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC21.73■■□□□ 1.07
TMEM88BA6NKF7 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC21.73■■□□□ 1.07
TMEM88BA6NKF7 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC21.73■■□□□ 1.07
TMEM88BA6NKF7 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC21.73■■□□□ 1.07
TMEM88BA6NKF7 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms