Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 RARRES2P4-201ENST00000514074 484 ntBASIC13.34□□□□□ -0.27
LINC01549A6NIU2 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC13.34□□□□□ -0.27
LINC01549A6NIU2 C2orf69P4-201ENST00000565394 541 ntBASIC13.34□□□□□ -0.27
LINC01549A6NIU2 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LINC01549A6NIU2 AL589743.5-201ENST00000616611 1050 ntBASIC13.34□□□□□ -0.27
LINC01549A6NIU2 AL136967.2-201ENST00000623968 743 ntBASIC13.34□□□□□ -0.27
LINC01549A6NIU2 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC01549A6NIU2 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC01549A6NIU2 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LINC01549A6NIU2 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC01549A6NIU2 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC01549A6NIU2 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LINC01549A6NIU2 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
LINC01549A6NIU2 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
LINC01549A6NIU2 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
LINC01549A6NIU2 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
LINC01549A6NIU2 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
LINC01549A6NIU2 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
LINC01549A6NIU2 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC13.33□□□□□ -0.27
LINC01549A6NIU2 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
LINC01549A6NIU2 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
LINC01549A6NIU2 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC01549A6NIU2 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC01549A6NIU2 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC13.33□□□□□ -0.28
LINC01549A6NIU2 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC13.33□□□□□ -0.28
LINC01549A6NIU2 LINC00896-202ENST00000609602 2128 ntBASIC13.33□□□□□ -0.28
LINC01549A6NIU2 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC01549A6NIU2 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
LINC01549A6NIU2 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC01549A6NIU2 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
LINC01549A6NIU2 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LINC01549A6NIU2 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC01549A6NIU2 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC01549A6NIU2 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC01549A6NIU2 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC01549A6NIU2 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC13.33□□□□□ -0.28
LINC01549A6NIU2 AC010536.3-201ENST00000620306 533 ntBASIC13.33□□□□□ -0.28
LINC01549A6NIU2 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC13.33□□□□□ -0.28
LINC01549A6NIU2 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC01549A6NIU2 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC01549A6NIU2 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC13.33□□□□□ -0.28
LINC01549A6NIU2 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LINC01549A6NIU2 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC01549A6NIU2 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC01549A6NIU2 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC01549A6NIU2 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LINC01549A6NIU2 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC01549A6NIU2 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC13.33□□□□□ -0.28
LINC01549A6NIU2 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC01549A6NIU2 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC01549A6NIU2 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC01549A6NIU2 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LINC01549A6NIU2 EML3-216ENST00000529309 2909 ntTSL 2 BASIC13.33□□□□□ -0.28
LINC01549A6NIU2 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC13.32□□□□□ -0.28
LINC01549A6NIU2 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC13.32□□□□□ -0.28
LINC01549A6NIU2 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01549A6NIU2 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01549A6NIU2 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01549A6NIU2 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01549A6NIU2 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01549A6NIU2 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01549A6NIU2 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC13.32□□□□□ -0.28
LINC01549A6NIU2 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01549A6NIU2 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01549A6NIU2 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01549A6NIU2 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01549A6NIU2 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01549A6NIU2 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC13.32□□□□□ -0.28
LINC01549A6NIU2 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01549A6NIU2 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
LINC01549A6NIU2 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01549A6NIU2 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01549A6NIU2 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC13.32□□□□□ -0.28
LINC01549A6NIU2 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC13.32□□□□□ -0.28
LINC01549A6NIU2 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC13.32□□□□□ -0.28
LINC01549A6NIU2 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01549A6NIU2 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01549A6NIU2 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC13.32□□□□□ -0.28
LINC01549A6NIU2 AC126763.1-201ENST00000552015 2118 ntBASIC13.32□□□□□ -0.28
LINC01549A6NIU2 MAX-217ENST00000557277 728 ntTSL 3 BASIC13.32□□□□□ -0.28
LINC01549A6NIU2 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC13.32□□□□□ -0.28
LINC01549A6NIU2 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC13.32□□□□□ -0.28
LINC01549A6NIU2 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01549A6NIU2 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
LINC01549A6NIU2 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01549A6NIU2 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01549A6NIU2 NXN-202ENST00000537628 1340 ntTSL 3 BASIC13.32□□□□□ -0.28
LINC01549A6NIU2 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01549A6NIU2 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01549A6NIU2 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01549A6NIU2 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01549A6NIU2 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01549A6NIU2 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
LINC01549A6NIU2 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01549A6NIU2 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01549A6NIU2 EML3-212ENST00000494176 2901 ntTSL 2 BASIC13.32□□□□□ -0.28
LINC01549A6NIU2 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LINC01549A6NIU2 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
LINC01549A6NIU2 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
LINC01549A6NIU2 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms