Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC66A2RUB6 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC66A2RUB6 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC20.28■□□□□ 0.84
CCDC66A2RUB6 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC20.28■□□□□ 0.84
CCDC66A2RUB6 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.28■□□□□ 0.84
CCDC66A2RUB6 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC20.28■□□□□ 0.84
CCDC66A2RUB6 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.28■□□□□ 0.84
CCDC66A2RUB6 AC006970.2-201ENST00000450065 779 ntBASIC20.28■□□□□ 0.84
CCDC66A2RUB6 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.28■□□□□ 0.84
CCDC66A2RUB6 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CCDC66A2RUB6 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.28■□□□□ 0.84
CCDC66A2RUB6 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.28■□□□□ 0.84
CCDC66A2RUB6 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.28■□□□□ 0.84
CCDC66A2RUB6 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC66A2RUB6 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
CCDC66A2RUB6 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC66A2RUB6 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
CCDC66A2RUB6 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC66A2RUB6 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC66A2RUB6 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC66A2RUB6 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC66A2RUB6 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.28■□□□□ 0.84
CCDC66A2RUB6 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC66A2RUB6 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC20.28■□□□□ 0.84
CCDC66A2RUB6 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC66A2RUB6 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20.28■□□□□ 0.84
CCDC66A2RUB6 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
CCDC66A2RUB6 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC66A2RUB6 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC66A2RUB6 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC66A2RUB6 KRT8P8-201ENST00000434750 1448 ntBASIC20.27■□□□□ 0.84
CCDC66A2RUB6 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC66A2RUB6 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.84
CCDC66A2RUB6 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.27■□□□□ 0.84
CCDC66A2RUB6 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
CCDC66A2RUB6 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC20.27■□□□□ 0.84
CCDC66A2RUB6 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC66A2RUB6 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC66A2RUB6 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC20.27■□□□□ 0.84
CCDC66A2RUB6 AC006333.2-201ENST00000607957 2099 ntBASIC20.27■□□□□ 0.84
CCDC66A2RUB6 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC66A2RUB6 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
CCDC66A2RUB6 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.27■□□□□ 0.84
CCDC66A2RUB6 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC66A2RUB6 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.27■□□□□ 0.84
CCDC66A2RUB6 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC66A2RUB6 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.27■□□□□ 0.84
CCDC66A2RUB6 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.27■□□□□ 0.84
CCDC66A2RUB6 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC66A2RUB6 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.27■□□□□ 0.84
CCDC66A2RUB6 HLA-B-256ENST00000639848 1089 ntBASIC20.27■□□□□ 0.84
CCDC66A2RUB6 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.84
CCDC66A2RUB6 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
CCDC66A2RUB6 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CCDC66A2RUB6 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
CCDC66A2RUB6 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
CCDC66A2RUB6 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.27■□□□□ 0.83
CCDC66A2RUB6 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC20.26■□□□□ 0.83
CCDC66A2RUB6 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC66A2RUB6 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC66A2RUB6 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.26■□□□□ 0.83
CCDC66A2RUB6 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
CCDC66A2RUB6 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC66A2RUB6 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC66A2RUB6 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC66A2RUB6 SLC29A4P1-201ENST00000398760 971 ntBASIC20.26■□□□□ 0.83
CCDC66A2RUB6 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.26■□□□□ 0.83
CCDC66A2RUB6 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CCDC66A2RUB6 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
CCDC66A2RUB6 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC66A2RUB6 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.26■□□□□ 0.83
CCDC66A2RUB6 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC66A2RUB6 USP49-202ENST00000373010 2446 ntTSL 5 BASIC20.26■□□□□ 0.83
CCDC66A2RUB6 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC20.26■□□□□ 0.83
CCDC66A2RUB6 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC66A2RUB6 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.26■□□□□ 0.83
CCDC66A2RUB6 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC66A2RUB6 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC66A2RUB6 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
CCDC66A2RUB6 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
CCDC66A2RUB6 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC66A2RUB6 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC66A2RUB6 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.25■□□□□ 0.83
CCDC66A2RUB6 AC092368.3-202ENST00000574180 1591 ntBASIC20.25■□□□□ 0.83
CCDC66A2RUB6 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC66A2RUB6 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC66A2RUB6 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.25■□□□□ 0.83
CCDC66A2RUB6 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC66A2RUB6 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC66A2RUB6 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC66A2RUB6 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC66A2RUB6 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC66A2RUB6 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC66A2RUB6 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC66A2RUB6 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC66A2RUB6 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.25■□□□□ 0.83
CCDC66A2RUB6 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC66A2RUB6 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC66A2RUB6 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CCDC66A2RUB6 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms