Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TCRBV4S1A1TA0A5B7 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
TCRBV4S1A1TA0A5B7 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TCRBV4S1A1TA0A5B7 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TCRBV4S1A1TA0A5B7 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
TCRBV4S1A1TA0A5B7 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
TCRBV4S1A1TA0A5B7 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TCRBV4S1A1TA0A5B7 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
TCRBV4S1A1TA0A5B7 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
TCRBV4S1A1TA0A5B7 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TCRBV4S1A1TA0A5B7 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TCRBV4S1A1TA0A5B7 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TCRBV4S1A1TA0A5B7 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TCRBV4S1A1TA0A5B7 AC005521.1-201ENST00000393351 872 ntBASIC15.09■□□□□ 0.01
TCRBV4S1A1TA0A5B7 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC15.09■□□□□ 0.01
TCRBV4S1A1TA0A5B7 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC15.09■□□□□ 0.01
TCRBV4S1A1TA0A5B7 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC15.09■□□□□ 0.01
TCRBV4S1A1TA0A5B7 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC15.09■□□□□ 0.01
TCRBV4S1A1TA0A5B7 AP005242.2-201ENST00000580065 1175 ntBASIC15.09■□□□□ 0.01
TCRBV4S1A1TA0A5B7 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TCRBV4S1A1TA0A5B7 AC092865.7-201ENST00000641832 219 ntBASIC15.09■□□□□ 0.01
TCRBV4S1A1TA0A5B7 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TCRBV4S1A1TA0A5B7 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC15.09■□□□□ 0.01
TCRBV4S1A1TA0A5B7 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC15.09■□□□□ 0.01
TCRBV4S1A1TA0A5B7 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TCRBV4S1A1TA0A5B7 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
TCRBV4S1A1TA0A5B7 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC15.09■□□□□ 0.01
TCRBV4S1A1TA0A5B7 USP39-202ENST00000409025 1946 ntTSL 5 BASIC15.09■□□□□ 0.01
TCRBV4S1A1TA0A5B7 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
TCRBV4S1A1TA0A5B7 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TCRBV4S1A1TA0A5B7 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TCRBV4S1A1TA0A5B7 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TCRBV4S1A1TA0A5B7 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC15.09■□□□□ 0.01
TCRBV4S1A1TA0A5B7 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC15.08■□□□□ 0.01
TCRBV4S1A1TA0A5B7 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
TCRBV4S1A1TA0A5B7 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
TCRBV4S1A1TA0A5B7 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC15.08■□□□□ 0.01
TCRBV4S1A1TA0A5B7 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC15.08■□□□□ 0.01
TCRBV4S1A1TA0A5B7 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
TCRBV4S1A1TA0A5B7 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TCRBV4S1A1TA0A5B7 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC15.08■□□□□ 0
TCRBV4S1A1TA0A5B7 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
TCRBV4S1A1TA0A5B7 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
TCRBV4S1A1TA0A5B7 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TCRBV4S1A1TA0A5B7 ANKRD18DP-204ENST00000455355 1975 ntBASIC15.08■□□□□ 0
TCRBV4S1A1TA0A5B7 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC15.08■□□□□ 0
TCRBV4S1A1TA0A5B7 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC15.08■□□□□ 0
TCRBV4S1A1TA0A5B7 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TCRBV4S1A1TA0A5B7 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
TCRBV4S1A1TA0A5B7 AC113347.1-201ENST00000413321 391 ntBASIC15.08■□□□□ 0
TCRBV4S1A1TA0A5B7 PTPA-216ENST00000432651 857 ntTSL 2 BASIC15.08■□□□□ 0
TCRBV4S1A1TA0A5B7 ATP5G1P1-201ENST00000448724 379 ntBASIC15.08■□□□□ 0
TCRBV4S1A1TA0A5B7 AC128688.1-201ENST00000487626 519 ntBASIC15.08■□□□□ 0
TCRBV4S1A1TA0A5B7 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC15.08■□□□□ 0
TCRBV4S1A1TA0A5B7 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC15.08■□□□□ 0
TCRBV4S1A1TA0A5B7 DUT-205ENST00000558813 769 ntTSL 2 BASIC15.08■□□□□ 0
TCRBV4S1A1TA0A5B7 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC15.08■□□□□ 0
TCRBV4S1A1TA0A5B7 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TCRBV4S1A1TA0A5B7 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC15.08■□□□□ 0
TCRBV4S1A1TA0A5B7 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TCRBV4S1A1TA0A5B7 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC15.08■□□□□ 0
TCRBV4S1A1TA0A5B7 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC15.08■□□□□ 0
TCRBV4S1A1TA0A5B7 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC15.08■□□□□ 0
TCRBV4S1A1TA0A5B7 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TCRBV4S1A1TA0A5B7 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC15.08■□□□□ 0
TCRBV4S1A1TA0A5B7 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
TCRBV4S1A1TA0A5B7 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TCRBV4S1A1TA0A5B7 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC15.08■□□□□ 0
TCRBV4S1A1TA0A5B7 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
TCRBV4S1A1TA0A5B7 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TCRBV4S1A1TA0A5B7 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
TCRBV4S1A1TA0A5B7 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TCRBV4S1A1TA0A5B7 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
TCRBV4S1A1TA0A5B7 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
TCRBV4S1A1TA0A5B7 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC15.07■□□□□ 0
TCRBV4S1A1TA0A5B7 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC15.07■□□□□ 0
TCRBV4S1A1TA0A5B7 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TCRBV4S1A1TA0A5B7 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TCRBV4S1A1TA0A5B7 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TCRBV4S1A1TA0A5B7 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TCRBV4S1A1TA0A5B7 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TCRBV4S1A1TA0A5B7 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TCRBV4S1A1TA0A5B7 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
TCRBV4S1A1TA0A5B7 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
TCRBV4S1A1TA0A5B7 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TCRBV4S1A1TA0A5B7 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC15.07■□□□□ 0
TCRBV4S1A1TA0A5B7 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
TCRBV4S1A1TA0A5B7 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
TCRBV4S1A1TA0A5B7 AC104417.2-201ENST00000562989 1793 ntBASIC15.07■□□□□ 0
TCRBV4S1A1TA0A5B7 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC15.07■□□□□ 0
TCRBV4S1A1TA0A5B7 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TCRBV4S1A1TA0A5B7 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
TCRBV4S1A1TA0A5B7 NME1-207ENST00000480143 964 ntTSL 2 BASIC15.07■□□□□ 0
TCRBV4S1A1TA0A5B7 AL049597.2-201ENST00000565575 961 ntBASIC15.07■□□□□ 0
TCRBV4S1A1TA0A5B7 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
TCRBV4S1A1TA0A5B7 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC15.07■□□□□ 0
TCRBV4S1A1TA0A5B7 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
TCRBV4S1A1TA0A5B7 AP000692.2-201ENST00000608391 879 ntBASIC15.07■□□□□ 0
TCRBV4S1A1TA0A5B7 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TCRBV4S1A1TA0A5B7 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms