Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRDV1A0A1B0GX56 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRDV1A0A1B0GX56 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC16.51■□□□□ 0.23
TRDV1A0A1B0GX56 AC231657.2-201ENST00000624556 255 ntBASIC16.51■□□□□ 0.23
TRDV1A0A1B0GX56 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRDV1A0A1B0GX56 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRDV1A0A1B0GX56 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRDV1A0A1B0GX56 AC099398.1-201ENST00000567919 2776 ntBASIC16.51■□□□□ 0.23
TRDV1A0A1B0GX56 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.51■□□□□ 0.23
TRDV1A0A1B0GX56 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC16.51■□□□□ 0.23
TRDV1A0A1B0GX56 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
TRDV1A0A1B0GX56 RCC2P6-201ENST00000526625 1557 ntBASIC16.51■□□□□ 0.23
TRDV1A0A1B0GX56 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRDV1A0A1B0GX56 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.5■□□□□ 0.23
TRDV1A0A1B0GX56 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.5■□□□□ 0.23
TRDV1A0A1B0GX56 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
TRDV1A0A1B0GX56 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRDV1A0A1B0GX56 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRDV1A0A1B0GX56 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
TRDV1A0A1B0GX56 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
TRDV1A0A1B0GX56 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
TRDV1A0A1B0GX56 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.5■□□□□ 0.23
TRDV1A0A1B0GX56 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRDV1A0A1B0GX56 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC16.5■□□□□ 0.23
TRDV1A0A1B0GX56 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC16.5■□□□□ 0.23
TRDV1A0A1B0GX56 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC16.5■□□□□ 0.23
TRDV1A0A1B0GX56 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRDV1A0A1B0GX56 AC011767.1-201ENST00000617410 1153 ntBASIC16.5■□□□□ 0.23
TRDV1A0A1B0GX56 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC16.5■□□□□ 0.23
TRDV1A0A1B0GX56 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRDV1A0A1B0GX56 AC112777.1-201ENST00000540175 1423 ntBASIC16.5■□□□□ 0.23
TRDV1A0A1B0GX56 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
TRDV1A0A1B0GX56 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
TRDV1A0A1B0GX56 AL645608.8-201ENST00000606034 2086 ntBASIC16.5■□□□□ 0.23
TRDV1A0A1B0GX56 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRDV1A0A1B0GX56 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRDV1A0A1B0GX56 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
TRDV1A0A1B0GX56 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRDV1A0A1B0GX56 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.5■□□□□ 0.23
TRDV1A0A1B0GX56 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
TRDV1A0A1B0GX56 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRDV1A0A1B0GX56 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRDV1A0A1B0GX56 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.5■□□□□ 0.23
TRDV1A0A1B0GX56 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC16.49■□□□□ 0.23
TRDV1A0A1B0GX56 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRDV1A0A1B0GX56 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRDV1A0A1B0GX56 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRDV1A0A1B0GX56 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
TRDV1A0A1B0GX56 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRDV1A0A1B0GX56 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRDV1A0A1B0GX56 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRDV1A0A1B0GX56 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
TRDV1A0A1B0GX56 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRDV1A0A1B0GX56 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRDV1A0A1B0GX56 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRDV1A0A1B0GX56 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRDV1A0A1B0GX56 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRDV1A0A1B0GX56 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRDV1A0A1B0GX56 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.49■□□□□ 0.23
TRDV1A0A1B0GX56 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
TRDV1A0A1B0GX56 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
TRDV1A0A1B0GX56 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
TRDV1A0A1B0GX56 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC16.49■□□□□ 0.23
TRDV1A0A1B0GX56 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC16.49■□□□□ 0.23
TRDV1A0A1B0GX56 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC16.49■□□□□ 0.23
TRDV1A0A1B0GX56 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRDV1A0A1B0GX56 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
TRDV1A0A1B0GX56 AC068587.9-201ENST00000641814 219 ntBASIC16.49■□□□□ 0.23
TRDV1A0A1B0GX56 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRDV1A0A1B0GX56 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRDV1A0A1B0GX56 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
TRDV1A0A1B0GX56 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.49■□□□□ 0.23
TRDV1A0A1B0GX56 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
TRDV1A0A1B0GX56 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
TRDV1A0A1B0GX56 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
TRDV1A0A1B0GX56 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC16.49■□□□□ 0.23
TRDV1A0A1B0GX56 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.49■□□□□ 0.23
TRDV1A0A1B0GX56 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRDV1A0A1B0GX56 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRDV1A0A1B0GX56 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRDV1A0A1B0GX56 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
TRDV1A0A1B0GX56 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRDV1A0A1B0GX56 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.48■□□□□ 0.23
TRDV1A0A1B0GX56 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
TRDV1A0A1B0GX56 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.48■□□□□ 0.23
TRDV1A0A1B0GX56 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRDV1A0A1B0GX56 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRDV1A0A1B0GX56 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRDV1A0A1B0GX56 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.48■□□□□ 0.23
TRDV1A0A1B0GX56 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
TRDV1A0A1B0GX56 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRDV1A0A1B0GX56 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.48■□□□□ 0.23
TRDV1A0A1B0GX56 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
TRDV1A0A1B0GX56 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
TRDV1A0A1B0GX56 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
TRDV1A0A1B0GX56 AC007322.1-201ENST00000426983 750 ntBASIC16.48■□□□□ 0.23
TRDV1A0A1B0GX56 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC16.48■□□□□ 0.23
TRDV1A0A1B0GX56 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
TRDV1A0A1B0GX56 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRDV1A0A1B0GX56 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms