Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC13.09□□□□□ -0.31
TRAV13-1A0A0B4J241 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC13.09□□□□□ -0.31
TRAV13-1A0A0B4J241 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRAV13-1A0A0B4J241 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
TRAV13-1A0A0B4J241 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
TRAV13-1A0A0B4J241 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC13.08□□□□□ -0.32
TRAV13-1A0A0B4J241 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV13-1A0A0B4J241 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
TRAV13-1A0A0B4J241 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV13-1A0A0B4J241 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV13-1A0A0B4J241 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV13-1A0A0B4J241 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC13.08□□□□□ -0.32
TRAV13-1A0A0B4J241 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV13-1A0A0B4J241 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV13-1A0A0B4J241 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
TRAV13-1A0A0B4J241 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
TRAV13-1A0A0B4J241 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC13.08□□□□□ -0.32
TRAV13-1A0A0B4J241 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC13.08□□□□□ -0.32
TRAV13-1A0A0B4J241 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC13.08□□□□□ -0.32
TRAV13-1A0A0B4J241 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC13.08□□□□□ -0.32
TRAV13-1A0A0B4J241 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC13.08□□□□□ -0.32
TRAV13-1A0A0B4J241 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC13.08□□□□□ -0.32
TRAV13-1A0A0B4J241 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC13.08□□□□□ -0.32
TRAV13-1A0A0B4J241 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
TRAV13-1A0A0B4J241 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC13.08□□□□□ -0.32
TRAV13-1A0A0B4J241 ANKRD20A6P-201ENST00000618763 204 ntBASIC13.08□□□□□ -0.32
TRAV13-1A0A0B4J241 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
TRAV13-1A0A0B4J241 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV13-1A0A0B4J241 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC13.08□□□□□ -0.32
TRAV13-1A0A0B4J241 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV13-1A0A0B4J241 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV13-1A0A0B4J241 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV13-1A0A0B4J241 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV13-1A0A0B4J241 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV13-1A0A0B4J241 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
TRAV13-1A0A0B4J241 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC13.08□□□□□ -0.32
TRAV13-1A0A0B4J241 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
TRAV13-1A0A0B4J241 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV13-1A0A0B4J241 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV13-1A0A0B4J241 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
TRAV13-1A0A0B4J241 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
TRAV13-1A0A0B4J241 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV13-1A0A0B4J241 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV13-1A0A0B4J241 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC13.07□□□□□ -0.32
TRAV13-1A0A0B4J241 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC13.07□□□□□ -0.32
TRAV13-1A0A0B4J241 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC13.07□□□□□ -0.32
TRAV13-1A0A0B4J241 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC13.07□□□□□ -0.32
TRAV13-1A0A0B4J241 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
TRAV13-1A0A0B4J241 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV13-1A0A0B4J241 EFTUD1P1-204ENST00000560401 1798 ntBASIC13.07□□□□□ -0.32
TRAV13-1A0A0B4J241 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV13-1A0A0B4J241 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV13-1A0A0B4J241 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV13-1A0A0B4J241 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV13-1A0A0B4J241 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV13-1A0A0B4J241 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC13.07□□□□□ -0.32
TRAV13-1A0A0B4J241 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
TRAV13-1A0A0B4J241 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC13.07□□□□□ -0.32
TRAV13-1A0A0B4J241 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV13-1A0A0B4J241 AL162430.1-201ENST00000480705 870 ntBASIC13.07□□□□□ -0.32
TRAV13-1A0A0B4J241 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV13-1A0A0B4J241 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC13.07□□□□□ -0.32
TRAV13-1A0A0B4J241 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC13.07□□□□□ -0.32
TRAV13-1A0A0B4J241 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC13.07□□□□□ -0.32
TRAV13-1A0A0B4J241 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
TRAV13-1A0A0B4J241 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV13-1A0A0B4J241 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
TRAV13-1A0A0B4J241 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC13.07□□□□□ -0.32
TRAV13-1A0A0B4J241 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
TRAV13-1A0A0B4J241 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV13-1A0A0B4J241 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
TRAV13-1A0A0B4J241 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV13-1A0A0B4J241 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
TRAV13-1A0A0B4J241 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC13.07□□□□□ -0.32
TRAV13-1A0A0B4J241 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV13-1A0A0B4J241 ANO7L1-203ENST00000602586 1720 ntBASIC13.07□□□□□ -0.32
TRAV13-1A0A0B4J241 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
TRAV13-1A0A0B4J241 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV13-1A0A0B4J241 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV13-1A0A0B4J241 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV13-1A0A0B4J241 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC13.07□□□□□ -0.32
TRAV13-1A0A0B4J241 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV13-1A0A0B4J241 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV13-1A0A0B4J241 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV13-1A0A0B4J241 BICD1-207ENST00000551848 1962 ntBASIC13.07□□□□□ -0.32
TRAV13-1A0A0B4J241 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC13.07□□□□□ -0.32
TRAV13-1A0A0B4J241 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC13.07□□□□□ -0.32
TRAV13-1A0A0B4J241 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV13-1A0A0B4J241 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV13-1A0A0B4J241 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV13-1A0A0B4J241 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV13-1A0A0B4J241 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV13-1A0A0B4J241 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TRAV13-1A0A0B4J241 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAV13-1A0A0B4J241 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAV13-1A0A0B4J241 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC13.06□□□□□ -0.32
TRAV13-1A0A0B4J241 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAV13-1A0A0B4J241 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAV13-1A0A0B4J241 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TRAV13-1A0A0B4J241 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms