Protein–RNA interactions for Protein: A0A0B4J234

TRAV2, T-cell receptor alpha variable 2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV2A0A0B4J234 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV2A0A0B4J234 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
TRAV2A0A0B4J234 TSPY7P-201ENST00000431358 1114 ntBASIC14.21□□□□□ -0.13
TRAV2A0A0B4J234 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV2A0A0B4J234 RBM17P1-201ENST00000453646 1190 ntBASIC14.21□□□□□ -0.13
TRAV2A0A0B4J234 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV2A0A0B4J234 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC14.21□□□□□ -0.13
TRAV2A0A0B4J234 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC14.21□□□□□ -0.13
TRAV2A0A0B4J234 AC083906.6-201ENST00000641366 219 ntBASIC14.21□□□□□ -0.13
TRAV2A0A0B4J234 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV2A0A0B4J234 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV2A0A0B4J234 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV2A0A0B4J234 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV2A0A0B4J234 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV2A0A0B4J234 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV2A0A0B4J234 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC14.21□□□□□ -0.13
TRAV2A0A0B4J234 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TRAV2A0A0B4J234 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TRAV2A0A0B4J234 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC14.21□□□□□ -0.14
TRAV2A0A0B4J234 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
TRAV2A0A0B4J234 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
TRAV2A0A0B4J234 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TRAV2A0A0B4J234 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TRAV2A0A0B4J234 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC14.2□□□□□ -0.14
TRAV2A0A0B4J234 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV2A0A0B4J234 LETM1P2-201ENST00000597330 2178 ntBASIC14.2□□□□□ -0.14
TRAV2A0A0B4J234 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV2A0A0B4J234 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV2A0A0B4J234 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
TRAV2A0A0B4J234 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV2A0A0B4J234 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC14.2□□□□□ -0.14
TRAV2A0A0B4J234 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV2A0A0B4J234 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV2A0A0B4J234 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC14.2□□□□□ -0.14
TRAV2A0A0B4J234 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV2A0A0B4J234 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
TRAV2A0A0B4J234 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV2A0A0B4J234 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC14.2□□□□□ -0.14
TRAV2A0A0B4J234 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV2A0A0B4J234 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC14.2□□□□□ -0.14
TRAV2A0A0B4J234 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV2A0A0B4J234 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC14.2□□□□□ -0.14
TRAV2A0A0B4J234 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC14.2□□□□□ -0.14
TRAV2A0A0B4J234 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV2A0A0B4J234 AC093827.2-201ENST00000512654 315 ntBASIC14.2□□□□□ -0.14
TRAV2A0A0B4J234 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC14.2□□□□□ -0.14
TRAV2A0A0B4J234 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
TRAV2A0A0B4J234 FITM1-202ENST00000559294 800 ntBASIC14.2□□□□□ -0.14
TRAV2A0A0B4J234 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC14.2□□□□□ -0.14
TRAV2A0A0B4J234 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV2A0A0B4J234 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
TRAV2A0A0B4J234 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV2A0A0B4J234 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV2A0A0B4J234 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV2A0A0B4J234 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV2A0A0B4J234 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV2A0A0B4J234 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV2A0A0B4J234 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV2A0A0B4J234 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV2A0A0B4J234 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV2A0A0B4J234 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV2A0A0B4J234 OR6D1P-202ENST00000641007 5290 ntBASIC14.2□□□□□ -0.14
TRAV2A0A0B4J234 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV2A0A0B4J234 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV2A0A0B4J234 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV2A0A0B4J234 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV2A0A0B4J234 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC14.19□□□□□ -0.14
TRAV2A0A0B4J234 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC14.19□□□□□ -0.14
TRAV2A0A0B4J234 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV2A0A0B4J234 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC14.19□□□□□ -0.14
TRAV2A0A0B4J234 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC14.19□□□□□ -0.14
TRAV2A0A0B4J234 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV2A0A0B4J234 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV2A0A0B4J234 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
TRAV2A0A0B4J234 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV2A0A0B4J234 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV2A0A0B4J234 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
TRAV2A0A0B4J234 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
TRAV2A0A0B4J234 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
TRAV2A0A0B4J234 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV2A0A0B4J234 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV2A0A0B4J234 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV2A0A0B4J234 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC14.19□□□□□ -0.14
TRAV2A0A0B4J234 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV2A0A0B4J234 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV2A0A0B4J234 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
TRAV2A0A0B4J234 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC14.19□□□□□ -0.14
TRAV2A0A0B4J234 SLC25A1P2-201ENST00000430693 912 ntBASIC14.19□□□□□ -0.14
TRAV2A0A0B4J234 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC14.19□□□□□ -0.14
TRAV2A0A0B4J234 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC14.19□□□□□ -0.14
TRAV2A0A0B4J234 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV2A0A0B4J234 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC14.19□□□□□ -0.14
TRAV2A0A0B4J234 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV2A0A0B4J234 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC14.19□□□□□ -0.14
TRAV2A0A0B4J234 GLDC-219ENST00000640208 420 ntTSL 2 BASIC14.19□□□□□ -0.14
TRAV2A0A0B4J234 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC14.19□□□□□ -0.14
TRAV2A0A0B4J234 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV2A0A0B4J234 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV2A0A0B4J234 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV2A0A0B4J234 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms