Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
HMG20BQ9P0W2 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
HMG20BQ9P0W2 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC30.86■■■□□ 2.53
HMG20BQ9P0W2 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC30.86■■■□□ 2.53
HMG20BQ9P0W2 TPT1-202ENST00000379055 948 ntTSL 2 BASIC30.86■■■□□ 2.53
HMG20BQ9P0W2 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
HMG20BQ9P0W2 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC30.86■■■□□ 2.53
HMG20BQ9P0W2 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC30.86■■■□□ 2.53
HMG20BQ9P0W2 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
HMG20BQ9P0W2 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
HMG20BQ9P0W2 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
HMG20BQ9P0W2 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
HMG20BQ9P0W2 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
HMG20BQ9P0W2 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
HMG20BQ9P0W2 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC30.84■■■□□ 2.53
HMG20BQ9P0W2 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC30.83■■■□□ 2.53
HMG20BQ9P0W2 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC30.83■■■□□ 2.53
HMG20BQ9P0W2 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
HMG20BQ9P0W2 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC30.83■■■□□ 2.53
HMG20BQ9P0W2 MIR219A2-201ENST00000608502 1504 ntBASIC30.83■■■□□ 2.53
HMG20BQ9P0W2 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC30.82■■■□□ 2.53
HMG20BQ9P0W2 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC30.82■■■□□ 2.52
HMG20BQ9P0W2 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
HMG20BQ9P0W2 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC30.82■■■□□ 2.52
HMG20BQ9P0W2 BRD4-212ENST00000630599 726 ntTSL 2 BASIC30.82■■■□□ 2.52
HMG20BQ9P0W2 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC30.82■■■□□ 2.52
HMG20BQ9P0W2 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
HMG20BQ9P0W2 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
HMG20BQ9P0W2 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC30.81■■■□□ 2.52
HMG20BQ9P0W2 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC30.8■■■□□ 2.52
HMG20BQ9P0W2 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
HMG20BQ9P0W2 GPX1-201ENST00000419349 1106 ntBASIC30.79■■■□□ 2.52
HMG20BQ9P0W2 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC30.79■■■□□ 2.52
HMG20BQ9P0W2 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
HMG20BQ9P0W2 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC30.79■■■□□ 2.52
HMG20BQ9P0W2 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC30.79■■■□□ 2.52
HMG20BQ9P0W2 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC30.78■■■□□ 2.52
HMG20BQ9P0W2 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC30.78■■■□□ 2.52
HMG20BQ9P0W2 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
HMG20BQ9P0W2 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
HMG20BQ9P0W2 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC30.77■■■□□ 2.52
HMG20BQ9P0W2 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC30.77■■■□□ 2.52
HMG20BQ9P0W2 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
HMG20BQ9P0W2 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
HMG20BQ9P0W2 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC30.75■■■□□ 2.51
HMG20BQ9P0W2 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
HMG20BQ9P0W2 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC30.75■■■□□ 2.51
HMG20BQ9P0W2 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC30.74■■■□□ 2.51
HMG20BQ9P0W2 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
HMG20BQ9P0W2 DRD5P2-201ENST00000421395 2012 ntBASIC30.73■■■□□ 2.51
HMG20BQ9P0W2 CEP120-209ENST00000515110 606 ntTSL 3 BASIC30.73■■■□□ 2.51
HMG20BQ9P0W2 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC30.73■■■□□ 2.51
HMG20BQ9P0W2 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
HMG20BQ9P0W2 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
HMG20BQ9P0W2 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
HMG20BQ9P0W2 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
HMG20BQ9P0W2 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC30.72■■■□□ 2.51
HMG20BQ9P0W2 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
HMG20BQ9P0W2 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
HMG20BQ9P0W2 AC022413.1-201ENST00000624602 984 ntBASIC30.71■■■□□ 2.51
HMG20BQ9P0W2 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
HMG20BQ9P0W2 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC30.71■■■□□ 2.51
HMG20BQ9P0W2 AP002414.2-202ENST00000590929 1450 ntBASIC30.7■■■□□ 2.51
HMG20BQ9P0W2 AC142086.6-201ENST00000621154 1765 ntBASIC30.7■■■□□ 2.51
HMG20BQ9P0W2 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
HMG20BQ9P0W2 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC30.7■■■□□ 2.5
HMG20BQ9P0W2 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
HMG20BQ9P0W2 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC30.69■■■□□ 2.5
HMG20BQ9P0W2 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
HMG20BQ9P0W2 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
HMG20BQ9P0W2 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC30.67■■■□□ 2.5
HMG20BQ9P0W2 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC30.67■■■□□ 2.5
HMG20BQ9P0W2 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC30.67■■■□□ 2.5
HMG20BQ9P0W2 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
HMG20BQ9P0W2 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
HMG20BQ9P0W2 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC30.67■■■□□ 2.5
HMG20BQ9P0W2 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC30.67■■■□□ 2.5
HMG20BQ9P0W2 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC30.66■■■□□ 2.5
HMG20BQ9P0W2 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
HMG20BQ9P0W2 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
HMG20BQ9P0W2 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
HMG20BQ9P0W2 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC30.65■■■□□ 2.5
HMG20BQ9P0W2 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC30.65■■■□□ 2.5
HMG20BQ9P0W2 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
HMG20BQ9P0W2 RARRES2P2-201ENST00000394842 485 ntBASIC30.64■■■□□ 2.5
HMG20BQ9P0W2 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC30.64■■■□□ 2.5
HMG20BQ9P0W2 AC060814.1-201ENST00000554326 538 ntBASIC30.64■■■□□ 2.5
HMG20BQ9P0W2 MED25-210ENST00000612854 801 ntTSL 5 BASIC30.64■■■□□ 2.5
HMG20BQ9P0W2 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
HMG20BQ9P0W2 MED25-214ENST00000622402 642 ntTSL 5 BASIC30.64■■■□□ 2.5
HMG20BQ9P0W2 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
HMG20BQ9P0W2 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC30.63■■■□□ 2.49
HMG20BQ9P0W2 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
HMG20BQ9P0W2 RNF126P1-201ENST00000567452 1320 ntBASIC30.63■■■□□ 2.49
HMG20BQ9P0W2 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
HMG20BQ9P0W2 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC30.63■■■□□ 2.49
HMG20BQ9P0W2 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
HMG20BQ9P0W2 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
HMG20BQ9P0W2 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
HMG20BQ9P0W2 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC30.61■■■□□ 2.49
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms