Protein–RNA interactions for Protein: Q9NPA2

MMP25, Matrix metalloproteinase-25, humanhuman

Predictions only

Length 562 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP25Q9NPA2 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
MMP25Q9NPA2 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
MMP25Q9NPA2 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC23.53■■□□□ 1.36
MMP25Q9NPA2 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC23.53■■□□□ 1.36
MMP25Q9NPA2 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
MMP25Q9NPA2 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
MMP25Q9NPA2 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC23.52■■□□□ 1.36
MMP25Q9NPA2 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
MMP25Q9NPA2 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
MMP25Q9NPA2 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
MMP25Q9NPA2 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
MMP25Q9NPA2 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC23.5■■□□□ 1.35
MMP25Q9NPA2 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC23.5■■□□□ 1.35
MMP25Q9NPA2 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
MMP25Q9NPA2 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
MMP25Q9NPA2 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC23.49■■□□□ 1.35
MMP25Q9NPA2 BRD4-212ENST00000630599 726 ntTSL 2 BASIC23.49■■□□□ 1.35
MMP25Q9NPA2 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC23.49■■□□□ 1.35
MMP25Q9NPA2 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
MMP25Q9NPA2 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
MMP25Q9NPA2 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
MMP25Q9NPA2 MIR219A2-201ENST00000608502 1504 ntBASIC23.49■■□□□ 1.35
MMP25Q9NPA2 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
MMP25Q9NPA2 GPX1-201ENST00000419349 1106 ntBASIC23.48■■□□□ 1.35
MMP25Q9NPA2 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
MMP25Q9NPA2 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
MMP25Q9NPA2 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC23.47■■□□□ 1.35
MMP25Q9NPA2 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
MMP25Q9NPA2 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC23.47■■□□□ 1.35
MMP25Q9NPA2 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC23.47■■□□□ 1.35
MMP25Q9NPA2 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
MMP25Q9NPA2 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
MMP25Q9NPA2 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
MMP25Q9NPA2 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC23.46■■□□□ 1.35
MMP25Q9NPA2 CEP120-209ENST00000515110 606 ntTSL 3 BASIC23.46■■□□□ 1.35
MMP25Q9NPA2 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC23.46■■□□□ 1.35
MMP25Q9NPA2 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
MMP25Q9NPA2 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC23.45■■□□□ 1.34
MMP25Q9NPA2 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
MMP25Q9NPA2 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC23.44■■□□□ 1.34
MMP25Q9NPA2 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC23.44■■□□□ 1.34
MMP25Q9NPA2 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC23.44■■□□□ 1.34
MMP25Q9NPA2 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
MMP25Q9NPA2 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
MMP25Q9NPA2 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC23.43■■□□□ 1.34
MMP25Q9NPA2 AC022413.1-201ENST00000624602 984 ntBASIC23.43■■□□□ 1.34
MMP25Q9NPA2 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
MMP25Q9NPA2 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
MMP25Q9NPA2 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
MMP25Q9NPA2 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
MMP25Q9NPA2 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC23.42■■□□□ 1.34
MMP25Q9NPA2 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
MMP25Q9NPA2 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC23.41■■□□□ 1.34
MMP25Q9NPA2 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
MMP25Q9NPA2 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
MMP25Q9NPA2 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
MMP25Q9NPA2 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC23.41■■□□□ 1.34
MMP25Q9NPA2 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC23.41■■□□□ 1.34
MMP25Q9NPA2 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
MMP25Q9NPA2 RNF126P1-201ENST00000567452 1320 ntBASIC23.4■■□□□ 1.34
MMP25Q9NPA2 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC23.4■■□□□ 1.34
MMP25Q9NPA2 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC23.4■■□□□ 1.34
MMP25Q9NPA2 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
MMP25Q9NPA2 AP002414.2-202ENST00000590929 1450 ntBASIC23.39■■□□□ 1.34
MMP25Q9NPA2 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
MMP25Q9NPA2 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC23.39■■□□□ 1.33
MMP25Q9NPA2 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
MMP25Q9NPA2 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC23.39■■□□□ 1.33
MMP25Q9NPA2 RARRES2P2-201ENST00000394842 485 ntBASIC23.38■■□□□ 1.33
MMP25Q9NPA2 HES4-202ENST00000428771 1040 ntTSL 2 BASIC23.38■■□□□ 1.33
MMP25Q9NPA2 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC23.37■■□□□ 1.33
MMP25Q9NPA2 DRD5P2-201ENST00000421395 2012 ntBASIC23.36■■□□□ 1.33
MMP25Q9NPA2 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC23.36■■□□□ 1.33
MMP25Q9NPA2 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
MMP25Q9NPA2 AC060814.1-201ENST00000554326 538 ntBASIC23.35■■□□□ 1.33
MMP25Q9NPA2 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
MMP25Q9NPA2 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
MMP25Q9NPA2 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
MMP25Q9NPA2 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
MMP25Q9NPA2 AC142086.6-201ENST00000621154 1765 ntBASIC23.35■■□□□ 1.33
MMP25Q9NPA2 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
MMP25Q9NPA2 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
MMP25Q9NPA2 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC23.34■■□□□ 1.33
MMP25Q9NPA2 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC23.34■■□□□ 1.33
MMP25Q9NPA2 AC126177.7-201ENST00000547904 679 ntBASIC23.34■■□□□ 1.33
MMP25Q9NPA2 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC23.34■■□□□ 1.33
MMP25Q9NPA2 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
MMP25Q9NPA2 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC23.33■■□□□ 1.33
MMP25Q9NPA2 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
MMP25Q9NPA2 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC23.33■■□□□ 1.33
MMP25Q9NPA2 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
MMP25Q9NPA2 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
MMP25Q9NPA2 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
MMP25Q9NPA2 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
MMP25Q9NPA2 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.32
MMP25Q9NPA2 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC23.33■■□□□ 1.32
MMP25Q9NPA2 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC23.32■■□□□ 1.32
MMP25Q9NPA2 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
MMP25Q9NPA2 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
MMP25Q9NPA2 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC23.31■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms