Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC27.22■■□□□ 1.95
NUCKS1Q9H1E3 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC27.22■■□□□ 1.95
NUCKS1Q9H1E3 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
NUCKS1Q9H1E3 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
NUCKS1Q9H1E3 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC27.22■■□□□ 1.95
NUCKS1Q9H1E3 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
NUCKS1Q9H1E3 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
NUCKS1Q9H1E3 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC27.2■■□□□ 1.95
NUCKS1Q9H1E3 CIB2-204ENST00000557846 934 ntTSL 3 BASIC27.2■■□□□ 1.94
NUCKS1Q9H1E3 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC27.2■■□□□ 1.94
NUCKS1Q9H1E3 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC27.19■■□□□ 1.94
NUCKS1Q9H1E3 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC27.19■■□□□ 1.94
NUCKS1Q9H1E3 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC27.19■■□□□ 1.94
NUCKS1Q9H1E3 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
NUCKS1Q9H1E3 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC27.18■■□□□ 1.94
NUCKS1Q9H1E3 MLEC-202ENST00000412616 841 ntTSL 3 BASIC27.18■■□□□ 1.94
NUCKS1Q9H1E3 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC27.18■■□□□ 1.94
NUCKS1Q9H1E3 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
NUCKS1Q9H1E3 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC27.18■■□□□ 1.94
NUCKS1Q9H1E3 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC27.17■■□□□ 1.94
NUCKS1Q9H1E3 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC27.16■■□□□ 1.94
NUCKS1Q9H1E3 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC27.16■■□□□ 1.94
NUCKS1Q9H1E3 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC27.16■■□□□ 1.94
NUCKS1Q9H1E3 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC27.16■■□□□ 1.94
NUCKS1Q9H1E3 PKM-203ENST00000389093 2279 ntTSL 5 BASIC27.16■■□□□ 1.94
NUCKS1Q9H1E3 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC27.16■■□□□ 1.94
NUCKS1Q9H1E3 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
NUCKS1Q9H1E3 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
NUCKS1Q9H1E3 SHF-207ENST00000560540 2062 ntTSL 5 BASIC27.15■■□□□ 1.94
NUCKS1Q9H1E3 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
NUCKS1Q9H1E3 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
NUCKS1Q9H1E3 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
NUCKS1Q9H1E3 ABHD17AP4-201ENST00000411545 909 ntBASIC27.14■■□□□ 1.94
NUCKS1Q9H1E3 HGH1-207ENST00000628266 258 ntTSL 5 BASIC27.14■■□□□ 1.94
NUCKS1Q9H1E3 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC27.14■■□□□ 1.94
NUCKS1Q9H1E3 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
NUCKS1Q9H1E3 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC27.13■■□□□ 1.93
NUCKS1Q9H1E3 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC27.13■■□□□ 1.93
NUCKS1Q9H1E3 DUX4L29-201ENST00000425409 679 ntBASIC27.13■■□□□ 1.93
NUCKS1Q9H1E3 AC021231.2-201ENST00000594613 730 ntBASIC27.13■■□□□ 1.93
NUCKS1Q9H1E3 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC27.13■■□□□ 1.93
NUCKS1Q9H1E3 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC27.13■■□□□ 1.93
NUCKS1Q9H1E3 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC27.12■■□□□ 1.93
NUCKS1Q9H1E3 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC27.12■■□□□ 1.93
NUCKS1Q9H1E3 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC27.12■■□□□ 1.93
NUCKS1Q9H1E3 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC27.12■■□□□ 1.93
NUCKS1Q9H1E3 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC27.12■■□□□ 1.93
NUCKS1Q9H1E3 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
NUCKS1Q9H1E3 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC27.11■■□□□ 1.93
NUCKS1Q9H1E3 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
NUCKS1Q9H1E3 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
NUCKS1Q9H1E3 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC27.1■■□□□ 1.93
NUCKS1Q9H1E3 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
NUCKS1Q9H1E3 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
NUCKS1Q9H1E3 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC27.1■■□□□ 1.93
NUCKS1Q9H1E3 CALM3-209ENST00000597743 577 ntTSL 4 BASIC27.1■■□□□ 1.93
NUCKS1Q9H1E3 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
NUCKS1Q9H1E3 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC27.1■■□□□ 1.93
NUCKS1Q9H1E3 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC27.1■■□□□ 1.93
NUCKS1Q9H1E3 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
NUCKS1Q9H1E3 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
NUCKS1Q9H1E3 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC27.09■■□□□ 1.93
NUCKS1Q9H1E3 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
NUCKS1Q9H1E3 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
NUCKS1Q9H1E3 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
NUCKS1Q9H1E3 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC27.08■■□□□ 1.93
NUCKS1Q9H1E3 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC27.07■■□□□ 1.92
NUCKS1Q9H1E3 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC27.07■■□□□ 1.92
NUCKS1Q9H1E3 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
NUCKS1Q9H1E3 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
NUCKS1Q9H1E3 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
NUCKS1Q9H1E3 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC27.06■■□□□ 1.92
NUCKS1Q9H1E3 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC27.05■■□□□ 1.92
NUCKS1Q9H1E3 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC27.05■■□□□ 1.92
NUCKS1Q9H1E3 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
NUCKS1Q9H1E3 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
NUCKS1Q9H1E3 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
NUCKS1Q9H1E3 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC27.04■■□□□ 1.92
NUCKS1Q9H1E3 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC27.04■■□□□ 1.92
NUCKS1Q9H1E3 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
NUCKS1Q9H1E3 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC27.03■■□□□ 1.92
NUCKS1Q9H1E3 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
NUCKS1Q9H1E3 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC27.03■■□□□ 1.92
NUCKS1Q9H1E3 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC27.03■■□□□ 1.92
NUCKS1Q9H1E3 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC27.03■■□□□ 1.92
NUCKS1Q9H1E3 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC27.02■■□□□ 1.92
NUCKS1Q9H1E3 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
NUCKS1Q9H1E3 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC27.02■■□□□ 1.92
NUCKS1Q9H1E3 ZNRF2P2-203ENST00000454624 420 ntBASIC27.02■■□□□ 1.92
NUCKS1Q9H1E3 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
NUCKS1Q9H1E3 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
NUCKS1Q9H1E3 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
NUCKS1Q9H1E3 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC27.01■■□□□ 1.91
NUCKS1Q9H1E3 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC27■■□□□ 1.91
NUCKS1Q9H1E3 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC27■■□□□ 1.91
NUCKS1Q9H1E3 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC27■■□□□ 1.91
NUCKS1Q9H1E3 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC27■■□□□ 1.91
NUCKS1Q9H1E3 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC27■■□□□ 1.91
NUCKS1Q9H1E3 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC26.99■■□□□ 1.91
NUCKS1Q9H1E3 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms