Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC23.14■■□□□ 1.3
POLR2J3Q9H1A7 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC23.14■■□□□ 1.29
POLR2J3Q9H1A7 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
POLR2J3Q9H1A7 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
POLR2J3Q9H1A7 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
POLR2J3Q9H1A7 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
POLR2J3Q9H1A7 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC23.13■■□□□ 1.29
POLR2J3Q9H1A7 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
POLR2J3Q9H1A7 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC23.13■■□□□ 1.29
POLR2J3Q9H1A7 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
POLR2J3Q9H1A7 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
POLR2J3Q9H1A7 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC23.12■■□□□ 1.29
POLR2J3Q9H1A7 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC23.12■■□□□ 1.29
POLR2J3Q9H1A7 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
POLR2J3Q9H1A7 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
POLR2J3Q9H1A7 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC23.12■■□□□ 1.29
POLR2J3Q9H1A7 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
POLR2J3Q9H1A7 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
POLR2J3Q9H1A7 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC23.11■■□□□ 1.29
POLR2J3Q9H1A7 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
POLR2J3Q9H1A7 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
POLR2J3Q9H1A7 CALM3-209ENST00000597743 577 ntTSL 4 BASIC23.1■■□□□ 1.29
POLR2J3Q9H1A7 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
POLR2J3Q9H1A7 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
POLR2J3Q9H1A7 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
POLR2J3Q9H1A7 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
POLR2J3Q9H1A7 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
POLR2J3Q9H1A7 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
POLR2J3Q9H1A7 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
POLR2J3Q9H1A7 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
POLR2J3Q9H1A7 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
POLR2J3Q9H1A7 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
POLR2J3Q9H1A7 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
POLR2J3Q9H1A7 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
POLR2J3Q9H1A7 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
POLR2J3Q9H1A7 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.28
POLR2J3Q9H1A7 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC23.08■■□□□ 1.28
POLR2J3Q9H1A7 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
POLR2J3Q9H1A7 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC23.08■■□□□ 1.28
POLR2J3Q9H1A7 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
POLR2J3Q9H1A7 CIB2-204ENST00000557846 934 ntTSL 3 BASIC23.07■■□□□ 1.28
POLR2J3Q9H1A7 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
POLR2J3Q9H1A7 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
POLR2J3Q9H1A7 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC23.06■■□□□ 1.28
POLR2J3Q9H1A7 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
POLR2J3Q9H1A7 AC087741.3-201ENST00000624270 1347 ntBASIC23.06■■□□□ 1.28
POLR2J3Q9H1A7 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
POLR2J3Q9H1A7 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
POLR2J3Q9H1A7 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC23.05■■□□□ 1.28
POLR2J3Q9H1A7 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
POLR2J3Q9H1A7 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
POLR2J3Q9H1A7 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
POLR2J3Q9H1A7 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC23.03■■□□□ 1.28
POLR2J3Q9H1A7 AL449106.1-201ENST00000608517 1980 ntBASIC23.03■■□□□ 1.28
POLR2J3Q9H1A7 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
POLR2J3Q9H1A7 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC23.03■■□□□ 1.28
POLR2J3Q9H1A7 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
POLR2J3Q9H1A7 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
POLR2J3Q9H1A7 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC23.02■■□□□ 1.28
POLR2J3Q9H1A7 AC044849.2-201ENST00000606596 710 ntBASIC23.02■■□□□ 1.28
POLR2J3Q9H1A7 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
POLR2J3Q9H1A7 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
POLR2J3Q9H1A7 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC23.01■■□□□ 1.27
POLR2J3Q9H1A7 NRG1-221ENST00000614767 762 ntTSL 5 BASIC23.01■■□□□ 1.27
POLR2J3Q9H1A7 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
POLR2J3Q9H1A7 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
POLR2J3Q9H1A7 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
POLR2J3Q9H1A7 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
POLR2J3Q9H1A7 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC23■■□□□ 1.27
POLR2J3Q9H1A7 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
POLR2J3Q9H1A7 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
POLR2J3Q9H1A7 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC22.99■■□□□ 1.27
POLR2J3Q9H1A7 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC22.99■■□□□ 1.27
POLR2J3Q9H1A7 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
POLR2J3Q9H1A7 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
POLR2J3Q9H1A7 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
POLR2J3Q9H1A7 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
POLR2J3Q9H1A7 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
POLR2J3Q9H1A7 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
POLR2J3Q9H1A7 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
POLR2J3Q9H1A7 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
POLR2J3Q9H1A7 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
POLR2J3Q9H1A7 AC135731.1-201ENST00000569415 2548 ntBASIC22.98■■□□□ 1.27
POLR2J3Q9H1A7 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC22.98■■□□□ 1.27
POLR2J3Q9H1A7 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
POLR2J3Q9H1A7 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
POLR2J3Q9H1A7 AL162393.1-201ENST00000437852 946 ntBASIC22.97■■□□□ 1.27
POLR2J3Q9H1A7 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
POLR2J3Q9H1A7 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
POLR2J3Q9H1A7 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC22.96■■□□□ 1.27
POLR2J3Q9H1A7 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
POLR2J3Q9H1A7 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC22.96■■□□□ 1.27
POLR2J3Q9H1A7 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC22.95■■□□□ 1.26
POLR2J3Q9H1A7 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC22.95■■□□□ 1.26
POLR2J3Q9H1A7 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
POLR2J3Q9H1A7 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC22.94■■□□□ 1.26
POLR2J3Q9H1A7 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
POLR2J3Q9H1A7 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
POLR2J3Q9H1A7 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
POLR2J3Q9H1A7 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms