Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
LCE3DQ9BYE3 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
LCE3DQ9BYE3 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
LCE3DQ9BYE3 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
LCE3DQ9BYE3 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
LCE3DQ9BYE3 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC6.76□□□□□ -1.33
LCE3DQ9BYE3 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
LCE3DQ9BYE3 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
LCE3DQ9BYE3 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
LCE3DQ9BYE3 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC6.76□□□□□ -1.33
LCE3DQ9BYE3 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
LCE3DQ9BYE3 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
LCE3DQ9BYE3 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC6.76□□□□□ -1.33
LCE3DQ9BYE3 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
LCE3DQ9BYE3 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
LCE3DQ9BYE3 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
LCE3DQ9BYE3 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC6.75□□□□□ -1.33
LCE3DQ9BYE3 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC6.75□□□□□ -1.33
LCE3DQ9BYE3 AP004833.2-201ENST00000532228 1454 ntBASIC6.75□□□□□ -1.33
LCE3DQ9BYE3 PKD1P6-201ENST00000343738 4769 ntBASIC6.75□□□□□ -1.33
LCE3DQ9BYE3 EBPL-203ENST00000378270 579 ntTSL 2 BASIC6.75□□□□□ -1.33
LCE3DQ9BYE3 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC6.75□□□□□ -1.33
LCE3DQ9BYE3 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
LCE3DQ9BYE3 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
LCE3DQ9BYE3 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC6.75□□□□□ -1.33
LCE3DQ9BYE3 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
LCE3DQ9BYE3 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC6.75□□□□□ -1.33
LCE3DQ9BYE3 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
LCE3DQ9BYE3 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC6.75□□□□□ -1.33
LCE3DQ9BYE3 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
LCE3DQ9BYE3 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
LCE3DQ9BYE3 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC6.75□□□□□ -1.33
LCE3DQ9BYE3 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
LCE3DQ9BYE3 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
LCE3DQ9BYE3 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
LCE3DQ9BYE3 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
LCE3DQ9BYE3 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
LCE3DQ9BYE3 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
LCE3DQ9BYE3 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
LCE3DQ9BYE3 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC6.74□□□□□ -1.33
LCE3DQ9BYE3 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC6.74□□□□□ -1.33
LCE3DQ9BYE3 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC6.74□□□□□ -1.33
LCE3DQ9BYE3 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
LCE3DQ9BYE3 AC091060.1-201ENST00000623524 1766 ntBASIC6.74□□□□□ -1.33
LCE3DQ9BYE3 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
LCE3DQ9BYE3 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
LCE3DQ9BYE3 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
LCE3DQ9BYE3 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
LCE3DQ9BYE3 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
LCE3DQ9BYE3 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC6.73□□□□□ -1.33
LCE3DQ9BYE3 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
LCE3DQ9BYE3 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC6.73□□□□□ -1.33
LCE3DQ9BYE3 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC6.73□□□□□ -1.33
LCE3DQ9BYE3 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
LCE3DQ9BYE3 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
LCE3DQ9BYE3 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
LCE3DQ9BYE3 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
LCE3DQ9BYE3 AC010864.1-201ENST00000609407 1511 ntBASIC6.73□□□□□ -1.33
LCE3DQ9BYE3 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC6.73□□□□□ -1.33
LCE3DQ9BYE3 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
LCE3DQ9BYE3 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
LCE3DQ9BYE3 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
LCE3DQ9BYE3 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC6.73□□□□□ -1.33
LCE3DQ9BYE3 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
LCE3DQ9BYE3 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
LCE3DQ9BYE3 SNAI3-AS1-204ENST00000567997 2048 ntBASIC6.72□□□□□ -1.33
LCE3DQ9BYE3 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC6.72□□□□□ -1.33
LCE3DQ9BYE3 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
LCE3DQ9BYE3 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
LCE3DQ9BYE3 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
LCE3DQ9BYE3 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC6.72□□□□□ -1.33
LCE3DQ9BYE3 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
LCE3DQ9BYE3 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
LCE3DQ9BYE3 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
LCE3DQ9BYE3 AC145676.1-201ENST00000514988 2004 ntBASIC6.72□□□□□ -1.33
LCE3DQ9BYE3 AC020928.2-201ENST00000588717 2197 ntBASIC6.72□□□□□ -1.33
LCE3DQ9BYE3 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
LCE3DQ9BYE3 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC6.72□□□□□ -1.33
LCE3DQ9BYE3 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
LCE3DQ9BYE3 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC6.72□□□□□ -1.33
LCE3DQ9BYE3 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
LCE3DQ9BYE3 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
LCE3DQ9BYE3 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
LCE3DQ9BYE3 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC6.71□□□□□ -1.33
LCE3DQ9BYE3 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
LCE3DQ9BYE3 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC6.71□□□□□ -1.34
LCE3DQ9BYE3 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC6.71□□□□□ -1.34
LCE3DQ9BYE3 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
LCE3DQ9BYE3 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC6.71□□□□□ -1.34
LCE3DQ9BYE3 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC6.71□□□□□ -1.34
LCE3DQ9BYE3 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC6.71□□□□□ -1.34
LCE3DQ9BYE3 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
LCE3DQ9BYE3 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
LCE3DQ9BYE3 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
LCE3DQ9BYE3 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
LCE3DQ9BYE3 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
LCE3DQ9BYE3 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC6.71□□□□□ -1.34
LCE3DQ9BYE3 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC6.71□□□□□ -1.34
LCE3DQ9BYE3 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC6.71□□□□□ -1.34
LCE3DQ9BYE3 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 550.9 ms