Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SSBP3Q9BWW4 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SSBP3Q9BWW4 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SSBP3Q9BWW4 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC20.97■□□□□ 0.95
SSBP3Q9BWW4 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC20.96■□□□□ 0.95
SSBP3Q9BWW4 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SSBP3Q9BWW4 MIR219A2-201ENST00000608502 1504 ntBASIC20.96■□□□□ 0.95
SSBP3Q9BWW4 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SSBP3Q9BWW4 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC20.96■□□□□ 0.95
SSBP3Q9BWW4 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
SSBP3Q9BWW4 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SSBP3Q9BWW4 CEP120-209ENST00000515110 606 ntTSL 3 BASIC20.95■□□□□ 0.94
SSBP3Q9BWW4 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC20.95■□□□□ 0.94
SSBP3Q9BWW4 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
SSBP3Q9BWW4 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SSBP3Q9BWW4 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
SSBP3Q9BWW4 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SSBP3Q9BWW4 GPX1-201ENST00000419349 1106 ntBASIC20.93■□□□□ 0.94
SSBP3Q9BWW4 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
SSBP3Q9BWW4 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SSBP3Q9BWW4 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SSBP3Q9BWW4 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC20.92■□□□□ 0.94
SSBP3Q9BWW4 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC20.92■□□□□ 0.94
SSBP3Q9BWW4 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SSBP3Q9BWW4 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SSBP3Q9BWW4 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
SSBP3Q9BWW4 BRD4-212ENST00000630599 726 ntTSL 2 BASIC20.92■□□□□ 0.94
SSBP3Q9BWW4 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC20.92■□□□□ 0.94
SSBP3Q9BWW4 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
SSBP3Q9BWW4 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SSBP3Q9BWW4 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
SSBP3Q9BWW4 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SSBP3Q9BWW4 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC20.92■□□□□ 0.94
SSBP3Q9BWW4 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
SSBP3Q9BWW4 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC20.91■□□□□ 0.94
SSBP3Q9BWW4 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SSBP3Q9BWW4 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SSBP3Q9BWW4 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SSBP3Q9BWW4 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
SSBP3Q9BWW4 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SSBP3Q9BWW4 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
SSBP3Q9BWW4 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SSBP3Q9BWW4 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC20.9■□□□□ 0.94
SSBP3Q9BWW4 AC022413.1-201ENST00000624602 984 ntBASIC20.9■□□□□ 0.94
SSBP3Q9BWW4 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SSBP3Q9BWW4 AP002414.2-202ENST00000590929 1450 ntBASIC20.89■□□□□ 0.94
SSBP3Q9BWW4 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
SSBP3Q9BWW4 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
SSBP3Q9BWW4 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SSBP3Q9BWW4 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
SSBP3Q9BWW4 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC20.89■□□□□ 0.93
SSBP3Q9BWW4 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
SSBP3Q9BWW4 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SSBP3Q9BWW4 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC20.88■□□□□ 0.93
SSBP3Q9BWW4 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
SSBP3Q9BWW4 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SSBP3Q9BWW4 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
SSBP3Q9BWW4 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
SSBP3Q9BWW4 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SSBP3Q9BWW4 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SSBP3Q9BWW4 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
SSBP3Q9BWW4 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SSBP3Q9BWW4 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SSBP3Q9BWW4 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SSBP3Q9BWW4 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SSBP3Q9BWW4 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC20.87■□□□□ 0.93
SSBP3Q9BWW4 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SSBP3Q9BWW4 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SSBP3Q9BWW4 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SSBP3Q9BWW4 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SSBP3Q9BWW4 AC126177.7-201ENST00000547904 679 ntBASIC20.86■□□□□ 0.93
SSBP3Q9BWW4 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SSBP3Q9BWW4 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SSBP3Q9BWW4 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SSBP3Q9BWW4 HES4-202ENST00000428771 1040 ntTSL 2 BASIC20.84■□□□□ 0.93
SSBP3Q9BWW4 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC20.84■□□□□ 0.93
SSBP3Q9BWW4 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SSBP3Q9BWW4 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20.84■□□□□ 0.93
SSBP3Q9BWW4 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC20.83■□□□□ 0.93
SSBP3Q9BWW4 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SSBP3Q9BWW4 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
SSBP3Q9BWW4 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
SSBP3Q9BWW4 RNF126P1-201ENST00000567452 1320 ntBASIC20.82■□□□□ 0.92
SSBP3Q9BWW4 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SSBP3Q9BWW4 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
SSBP3Q9BWW4 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC20.81■□□□□ 0.92
SSBP3Q9BWW4 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SSBP3Q9BWW4 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
SSBP3Q9BWW4 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
SSBP3Q9BWW4 RARRES2P2-201ENST00000394842 485 ntBASIC20.81■□□□□ 0.92
SSBP3Q9BWW4 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SSBP3Q9BWW4 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC20.81■□□□□ 0.92
SSBP3Q9BWW4 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
SSBP3Q9BWW4 AC139426.1-201ENST00000568218 2529 ntBASIC20.81■□□□□ 0.92
SSBP3Q9BWW4 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SSBP3Q9BWW4 AC060814.1-201ENST00000554326 538 ntBASIC20.8■□□□□ 0.92
SSBP3Q9BWW4 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC20.8■□□□□ 0.92
SSBP3Q9BWW4 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SSBP3Q9BWW4 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SSBP3Q9BWW4 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms