Protein–RNA interactions for Protein: Q8NCU8

LINC00116, Uncharacterized protein encoded by LINC00116, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116Q8NCU8 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC32.61■■■□□ 2.81
LINC00116Q8NCU8 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
LINC00116Q8NCU8 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC32.6■■■□□ 2.81
LINC00116Q8NCU8 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC32.6■■■□□ 2.81
LINC00116Q8NCU8 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC32.59■■■□□ 2.81
LINC00116Q8NCU8 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC32.59■■■□□ 2.81
LINC00116Q8NCU8 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC32.59■■■□□ 2.81
LINC00116Q8NCU8 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
LINC00116Q8NCU8 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
LINC00116Q8NCU8 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC32.57■■■□□ 2.8
LINC00116Q8NCU8 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC32.57■■■□□ 2.8
LINC00116Q8NCU8 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
LINC00116Q8NCU8 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
LINC00116Q8NCU8 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
LINC00116Q8NCU8 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
LINC00116Q8NCU8 AC133552.2-201ENST00000619106 1032 ntBASIC32.55■■■□□ 2.8
LINC00116Q8NCU8 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
LINC00116Q8NCU8 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC32.54■■■□□ 2.8
LINC00116Q8NCU8 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
LINC00116Q8NCU8 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC32.54■■■□□ 2.8
LINC00116Q8NCU8 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
LINC00116Q8NCU8 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC32.53■■■□□ 2.8
LINC00116Q8NCU8 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC32.53■■■□□ 2.8
LINC00116Q8NCU8 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC32.53■■■□□ 2.8
LINC00116Q8NCU8 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
LINC00116Q8NCU8 AL035685.1-201ENST00000636663 812 ntBASIC32.52■■■□□ 2.8
LINC00116Q8NCU8 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC32.51■■■□□ 2.8
LINC00116Q8NCU8 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC32.51■■■□□ 2.79
LINC00116Q8NCU8 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC32.51■■■□□ 2.79
LINC00116Q8NCU8 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC32.51■■■□□ 2.79
LINC00116Q8NCU8 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC32.51■■■□□ 2.79
LINC00116Q8NCU8 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC32.51■■■□□ 2.79
LINC00116Q8NCU8 AL451085.2-201ENST00000605085 799 ntBASIC32.51■■■□□ 2.79
LINC00116Q8NCU8 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC32.51■■■□□ 2.79
LINC00116Q8NCU8 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC32.5■■■□□ 2.79
LINC00116Q8NCU8 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC32.5■■■□□ 2.79
LINC00116Q8NCU8 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
LINC00116Q8NCU8 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC32.49■■■□□ 2.79
LINC00116Q8NCU8 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC32.49■■■□□ 2.79
LINC00116Q8NCU8 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC32.48■■■□□ 2.79
LINC00116Q8NCU8 REST-210ENST00000638187 1334 ntTSL 5 BASIC32.48■■■□□ 2.79
LINC00116Q8NCU8 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC32.47■■■□□ 2.79
LINC00116Q8NCU8 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC32.46■■■□□ 2.79
LINC00116Q8NCU8 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
LINC00116Q8NCU8 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC32.46■■■□□ 2.79
LINC00116Q8NCU8 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC32.46■■■□□ 2.79
LINC00116Q8NCU8 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC32.45■■■□□ 2.79
LINC00116Q8NCU8 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC32.45■■■□□ 2.79
LINC00116Q8NCU8 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC32.45■■■□□ 2.79
LINC00116Q8NCU8 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
LINC00116Q8NCU8 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC32.44■■■□□ 2.78
LINC00116Q8NCU8 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
LINC00116Q8NCU8 AC026202.3-201ENST00000600805 1127 ntBASIC32.44■■■□□ 2.78
LINC00116Q8NCU8 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
LINC00116Q8NCU8 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC32.43■■■□□ 2.78
LINC00116Q8NCU8 SMPD5-203ENST00000639008 1464 ntBASIC32.42■■■□□ 2.78
LINC00116Q8NCU8 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
LINC00116Q8NCU8 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC32.42■■■□□ 2.78
LINC00116Q8NCU8 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC32.42■■■□□ 2.78
LINC00116Q8NCU8 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC32.41■■■□□ 2.78
LINC00116Q8NCU8 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
LINC00116Q8NCU8 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
LINC00116Q8NCU8 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
LINC00116Q8NCU8 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC32.41■■■□□ 2.78
LINC00116Q8NCU8 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC32.4■■■□□ 2.78
LINC00116Q8NCU8 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
LINC00116Q8NCU8 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC32.39■■■□□ 2.78
LINC00116Q8NCU8 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC32.39■■■□□ 2.78
LINC00116Q8NCU8 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC32.39■■■□□ 2.78
LINC00116Q8NCU8 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC32.39■■■□□ 2.78
LINC00116Q8NCU8 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC32.38■■■□□ 2.77
LINC00116Q8NCU8 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC32.38■■■□□ 2.77
LINC00116Q8NCU8 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC32.37■■■□□ 2.77
LINC00116Q8NCU8 AL359258.2-201ENST00000564063 1566 ntBASIC32.36■■■□□ 2.77
LINC00116Q8NCU8 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC32.36■■■□□ 2.77
LINC00116Q8NCU8 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
LINC00116Q8NCU8 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC32.36■■■□□ 2.77
LINC00116Q8NCU8 DUX4L9-201ENST00000449051 1259 ntBASIC32.36■■■□□ 2.77
LINC00116Q8NCU8 TRIR-205ENST00000592273 783 ntTSL 3 BASIC32.36■■■□□ 2.77
LINC00116Q8NCU8 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
LINC00116Q8NCU8 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC32.34■■■□□ 2.77
LINC00116Q8NCU8 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
LINC00116Q8NCU8 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
LINC00116Q8NCU8 AC025884.2-201ENST00000553429 711 ntBASIC32.34■■■□□ 2.77
LINC00116Q8NCU8 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC32.34■■■□□ 2.77
LINC00116Q8NCU8 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
LINC00116Q8NCU8 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC32.33■■■□□ 2.77
LINC00116Q8NCU8 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC32.32■■■□□ 2.77
LINC00116Q8NCU8 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC32.32■■■□□ 2.76
LINC00116Q8NCU8 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC32.32■■■□□ 2.76
LINC00116Q8NCU8 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC32.31■■■□□ 2.76
LINC00116Q8NCU8 SPCS2P3-201ENST00000500401 656 ntBASIC32.31■■■□□ 2.76
LINC00116Q8NCU8 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
LINC00116Q8NCU8 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
LINC00116Q8NCU8 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC32.3■■■□□ 2.76
LINC00116Q8NCU8 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC32.3■■■□□ 2.76
LINC00116Q8NCU8 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC32.3■■■□□ 2.76
LINC00116Q8NCU8 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC32.29■■■□□ 2.76
LINC00116Q8NCU8 AC010980.1-201ENST00000587192 1142 ntBASIC32.29■■■□□ 2.76
LINC00116Q8NCU8 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC32.29■■■□□ 2.76
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms