Protein–RNA interactions for Protein: Q8IY21

DDX60, Probable ATP-dependent RNA helicase DDX60, humanhuman

Known RBP Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60Q8IY21 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
DDX60Q8IY21 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC31.67■■■□□ 2.66
DDX60Q8IY21 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
DDX60Q8IY21 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC31.66■■■□□ 2.66
DDX60Q8IY21 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC31.65■■■□□ 2.66
DDX60Q8IY21 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC31.64■■■□□ 2.66
DDX60Q8IY21 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
DDX60Q8IY21 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
DDX60Q8IY21 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC31.63■■■□□ 2.65
DDX60Q8IY21 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC31.63■■■□□ 2.65
DDX60Q8IY21 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
DDX60Q8IY21 U85056.1-201ENST00000616429 682 ntBASIC31.63■■■□□ 2.65
DDX60Q8IY21 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
DDX60Q8IY21 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC31.62■■■□□ 2.65
DDX60Q8IY21 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC31.61■■■□□ 2.65
DDX60Q8IY21 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
DDX60Q8IY21 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC31.61■■■□□ 2.65
DDX60Q8IY21 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC31.6■■■□□ 2.65
DDX60Q8IY21 KRT18P60-201ENST00000312876 1297 ntBASIC31.6■■■□□ 2.65
DDX60Q8IY21 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC31.6■■■□□ 2.65
DDX60Q8IY21 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
DDX60Q8IY21 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC31.59■■■□□ 2.65
DDX60Q8IY21 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
DDX60Q8IY21 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
DDX60Q8IY21 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
DDX60Q8IY21 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC31.58■■■□□ 2.65
DDX60Q8IY21 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC31.57■■■□□ 2.64
DDX60Q8IY21 AC018358.1-201ENST00000631079 1402 ntBASIC31.57■■■□□ 2.64
DDX60Q8IY21 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
DDX60Q8IY21 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
DDX60Q8IY21 GFER-205ENST00000569451 517 ntTSL 5 BASIC31.55■■■□□ 2.64
DDX60Q8IY21 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
DDX60Q8IY21 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
DDX60Q8IY21 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
DDX60Q8IY21 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC31.51■■■□□ 2.64
DDX60Q8IY21 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
DDX60Q8IY21 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC31.51■■■□□ 2.63
DDX60Q8IY21 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
DDX60Q8IY21 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC31.5■■■□□ 2.63
DDX60Q8IY21 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
DDX60Q8IY21 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
DDX60Q8IY21 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC31.5■■■□□ 2.63
DDX60Q8IY21 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC31.49■■■□□ 2.63
DDX60Q8IY21 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC31.49■■■□□ 2.63
DDX60Q8IY21 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
DDX60Q8IY21 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC31.48■■■□□ 2.63
DDX60Q8IY21 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC31.48■■■□□ 2.63
DDX60Q8IY21 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC31.48■■■□□ 2.63
DDX60Q8IY21 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC31.47■■■□□ 2.63
DDX60Q8IY21 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
DDX60Q8IY21 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC31.47■■■□□ 2.63
DDX60Q8IY21 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
DDX60Q8IY21 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
DDX60Q8IY21 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC31.46■■■□□ 2.63
DDX60Q8IY21 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
DDX60Q8IY21 ECEL1P2-201ENST00000461596 1295 ntBASIC31.46■■■□□ 2.63
DDX60Q8IY21 AL033527.3-201ENST00000566366 1196 ntBASIC31.46■■■□□ 2.63
DDX60Q8IY21 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
DDX60Q8IY21 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC31.45■■■□□ 2.63
DDX60Q8IY21 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC31.45■■■□□ 2.63
DDX60Q8IY21 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
DDX60Q8IY21 AL139393.2-201ENST00000608721 2025 ntBASIC31.45■■■□□ 2.62
DDX60Q8IY21 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC31.44■■■□□ 2.62
DDX60Q8IY21 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
DDX60Q8IY21 ABCB10P3-201ENST00000561950 2166 ntBASIC31.44■■■□□ 2.62
DDX60Q8IY21 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC31.44■■■□□ 2.62
DDX60Q8IY21 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC31.44■■■□□ 2.62
DDX60Q8IY21 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC31.44■■■□□ 2.62
DDX60Q8IY21 AC126177.7-201ENST00000547904 679 ntBASIC31.44■■■□□ 2.62
DDX60Q8IY21 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC31.43■■■□□ 2.62
DDX60Q8IY21 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
DDX60Q8IY21 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC31.42■■■□□ 2.62
DDX60Q8IY21 AC007029.1-201ENST00000604183 313 ntBASIC31.41■■■□□ 2.62
DDX60Q8IY21 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC31.41■■■□□ 2.62
DDX60Q8IY21 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC31.41■■■□□ 2.62
DDX60Q8IY21 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
DDX60Q8IY21 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC31.4■■■□□ 2.62
DDX60Q8IY21 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC31.4■■■□□ 2.62
DDX60Q8IY21 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
DDX60Q8IY21 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC31.39■■■□□ 2.62
DDX60Q8IY21 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC31.39■■■□□ 2.62
DDX60Q8IY21 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
DDX60Q8IY21 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
DDX60Q8IY21 AC025884.2-201ENST00000553429 711 ntBASIC31.38■■■□□ 2.61
DDX60Q8IY21 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
DDX60Q8IY21 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC31.38■■■□□ 2.61
DDX60Q8IY21 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC31.37■■■□□ 2.61
DDX60Q8IY21 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC31.37■■■□□ 2.61
DDX60Q8IY21 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
DDX60Q8IY21 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
DDX60Q8IY21 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC31.35■■■□□ 2.61
DDX60Q8IY21 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC31.35■■■□□ 2.61
DDX60Q8IY21 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
DDX60Q8IY21 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC31.35■■■□□ 2.61
DDX60Q8IY21 AP002414.2-202ENST00000590929 1450 ntBASIC31.34■■■□□ 2.61
DDX60Q8IY21 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
DDX60Q8IY21 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC31.34■■■□□ 2.61
DDX60Q8IY21 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC31.33■■■□□ 2.61
DDX60Q8IY21 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
DDX60Q8IY21 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms