Protein–RNA interactions for Protein: Q7Z401

DENND4A, C-myc promoter-binding protein, humanhuman

Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4AQ7Z401 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC26.43■■□□□ 1.82
DENND4AQ7Z401 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
DENND4AQ7Z401 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
DENND4AQ7Z401 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC26.43■■□□□ 1.82
DENND4AQ7Z401 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
DENND4AQ7Z401 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
DENND4AQ7Z401 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
DENND4AQ7Z401 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
DENND4AQ7Z401 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC26.42■■□□□ 1.82
DENND4AQ7Z401 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
DENND4AQ7Z401 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
DENND4AQ7Z401 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC26.41■■□□□ 1.82
DENND4AQ7Z401 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC26.41■■□□□ 1.82
DENND4AQ7Z401 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
DENND4AQ7Z401 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC26.41■■□□□ 1.82
DENND4AQ7Z401 REST-210ENST00000638187 1334 ntTSL 5 BASIC26.41■■□□□ 1.82
DENND4AQ7Z401 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC26.41■■□□□ 1.82
DENND4AQ7Z401 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
DENND4AQ7Z401 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC26.4■■□□□ 1.82
DENND4AQ7Z401 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
DENND4AQ7Z401 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC26.39■■□□□ 1.82
DENND4AQ7Z401 AC009831.1-201ENST00000580420 1582 ntBASIC26.39■■□□□ 1.82
DENND4AQ7Z401 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
DENND4AQ7Z401 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
DENND4AQ7Z401 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
DENND4AQ7Z401 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
DENND4AQ7Z401 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC26.38■■□□□ 1.81
DENND4AQ7Z401 HES4-204ENST00000484667 667 ntTSL 3 BASIC26.38■■□□□ 1.81
DENND4AQ7Z401 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
DENND4AQ7Z401 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
DENND4AQ7Z401 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
DENND4AQ7Z401 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC26.37■■□□□ 1.81
DENND4AQ7Z401 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
DENND4AQ7Z401 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC26.37■■□□□ 1.81
DENND4AQ7Z401 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC26.36■■□□□ 1.81
DENND4AQ7Z401 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
DENND4AQ7Z401 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC26.36■■□□□ 1.81
DENND4AQ7Z401 AC025884.2-201ENST00000553429 711 ntBASIC26.36■■□□□ 1.81
DENND4AQ7Z401 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
DENND4AQ7Z401 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC26.35■■□□□ 1.81
DENND4AQ7Z401 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC26.35■■□□□ 1.81
DENND4AQ7Z401 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
DENND4AQ7Z401 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
DENND4AQ7Z401 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC26.34■■□□□ 1.81
DENND4AQ7Z401 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC26.34■■□□□ 1.81
DENND4AQ7Z401 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC26.34■■□□□ 1.81
DENND4AQ7Z401 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
DENND4AQ7Z401 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC26.34■■□□□ 1.81
DENND4AQ7Z401 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
DENND4AQ7Z401 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC26.34■■□□□ 1.81
DENND4AQ7Z401 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC26.34■■□□□ 1.81
DENND4AQ7Z401 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC26.34■■□□□ 1.81
DENND4AQ7Z401 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
DENND4AQ7Z401 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
DENND4AQ7Z401 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
DENND4AQ7Z401 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
DENND4AQ7Z401 TRIR-205ENST00000592273 783 ntTSL 3 BASIC26.33■■□□□ 1.81
DENND4AQ7Z401 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC26.33■■□□□ 1.81
DENND4AQ7Z401 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC26.33■■□□□ 1.8
DENND4AQ7Z401 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
DENND4AQ7Z401 AC133552.2-201ENST00000619106 1032 ntBASIC26.32■■□□□ 1.8
DENND4AQ7Z401 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
DENND4AQ7Z401 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC26.32■■□□□ 1.8
DENND4AQ7Z401 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
DENND4AQ7Z401 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
DENND4AQ7Z401 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
DENND4AQ7Z401 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC26.31■■□□□ 1.8
DENND4AQ7Z401 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
DENND4AQ7Z401 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
DENND4AQ7Z401 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC26.3■■□□□ 1.8
DENND4AQ7Z401 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC26.3■■□□□ 1.8
DENND4AQ7Z401 AL035685.1-201ENST00000636663 812 ntBASIC26.3■■□□□ 1.8
DENND4AQ7Z401 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
DENND4AQ7Z401 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC26.29■■□□□ 1.8
DENND4AQ7Z401 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC26.28■■□□□ 1.8
DENND4AQ7Z401 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
DENND4AQ7Z401 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
DENND4AQ7Z401 DUX4L9-201ENST00000449051 1259 ntBASIC26.28■■□□□ 1.8
DENND4AQ7Z401 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
DENND4AQ7Z401 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
DENND4AQ7Z401 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
DENND4AQ7Z401 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC26.26■■□□□ 1.79
DENND4AQ7Z401 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
DENND4AQ7Z401 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
DENND4AQ7Z401 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC26.25■■□□□ 1.79
DENND4AQ7Z401 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
DENND4AQ7Z401 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
DENND4AQ7Z401 AC093536.1-201ENST00000569153 554 ntBASIC26.23■■□□□ 1.79
DENND4AQ7Z401 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC26.23■■□□□ 1.79
DENND4AQ7Z401 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC26.23■■□□□ 1.79
DENND4AQ7Z401 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
DENND4AQ7Z401 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
DENND4AQ7Z401 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC26.22■■□□□ 1.79
DENND4AQ7Z401 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC26.22■■□□□ 1.79
DENND4AQ7Z401 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
DENND4AQ7Z401 RAP2CP1-202ENST00000605179 643 ntBASIC26.22■■□□□ 1.79
DENND4AQ7Z401 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
DENND4AQ7Z401 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
DENND4AQ7Z401 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC26.22■■□□□ 1.79
DENND4AQ7Z401 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms