Protein–RNA interactions for Protein: Q5SRH9

TTC39A, Tetratricopeptide repeat protein 39A, humanhuman

Predictions only

Length 613 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39AQ5SRH9 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC30.85■■■□□ 2.53
TTC39AQ5SRH9 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC30.85■■■□□ 2.53
TTC39AQ5SRH9 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
TTC39AQ5SRH9 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC30.84■■■□□ 2.53
TTC39AQ5SRH9 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
TTC39AQ5SRH9 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
TTC39AQ5SRH9 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC30.83■■■□□ 2.53
TTC39AQ5SRH9 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
TTC39AQ5SRH9 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.53
TTC39AQ5SRH9 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.53
TTC39AQ5SRH9 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC30.82■■■□□ 2.52
TTC39AQ5SRH9 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
TTC39AQ5SRH9 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
TTC39AQ5SRH9 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
TTC39AQ5SRH9 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC30.82■■■□□ 2.52
TTC39AQ5SRH9 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC30.82■■■□□ 2.52
TTC39AQ5SRH9 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
TTC39AQ5SRH9 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
TTC39AQ5SRH9 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
TTC39AQ5SRH9 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
TTC39AQ5SRH9 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
TTC39AQ5SRH9 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
TTC39AQ5SRH9 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
TTC39AQ5SRH9 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
TTC39AQ5SRH9 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
TTC39AQ5SRH9 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC30.8■■■□□ 2.52
TTC39AQ5SRH9 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
TTC39AQ5SRH9 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC30.79■■■□□ 2.52
TTC39AQ5SRH9 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
TTC39AQ5SRH9 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
TTC39AQ5SRH9 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
TTC39AQ5SRH9 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC30.79■■■□□ 2.52
TTC39AQ5SRH9 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC30.79■■■□□ 2.52
TTC39AQ5SRH9 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC30.78■■■□□ 2.52
TTC39AQ5SRH9 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC30.78■■■□□ 2.52
TTC39AQ5SRH9 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC30.78■■■□□ 2.52
TTC39AQ5SRH9 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC30.77■■■□□ 2.52
TTC39AQ5SRH9 HSD17B1P1-201ENST00000590052 955 ntBASIC30.77■■■□□ 2.52
TTC39AQ5SRH9 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC30.76■■■□□ 2.52
TTC39AQ5SRH9 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
TTC39AQ5SRH9 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
TTC39AQ5SRH9 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
TTC39AQ5SRH9 DRD5P2-201ENST00000421395 2012 ntBASIC30.75■■■□□ 2.51
TTC39AQ5SRH9 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
TTC39AQ5SRH9 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC30.75■■■□□ 2.51
TTC39AQ5SRH9 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
TTC39AQ5SRH9 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC30.74■■■□□ 2.51
TTC39AQ5SRH9 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
TTC39AQ5SRH9 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
TTC39AQ5SRH9 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC30.74■■■□□ 2.51
TTC39AQ5SRH9 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC30.74■■■□□ 2.51
TTC39AQ5SRH9 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
TTC39AQ5SRH9 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
TTC39AQ5SRH9 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
TTC39AQ5SRH9 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC30.73■■■□□ 2.51
TTC39AQ5SRH9 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
TTC39AQ5SRH9 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
TTC39AQ5SRH9 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
TTC39AQ5SRH9 CEP120-209ENST00000515110 606 ntTSL 3 BASIC30.72■■■□□ 2.51
TTC39AQ5SRH9 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC30.72■■■□□ 2.51
TTC39AQ5SRH9 PROC-203ENST00000409048 1586 ntTSL 5 BASIC30.71■■■□□ 2.51
TTC39AQ5SRH9 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
TTC39AQ5SRH9 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
TTC39AQ5SRH9 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC30.7■■■□□ 2.51
TTC39AQ5SRH9 GPX1-201ENST00000419349 1106 ntBASIC30.7■■■□□ 2.51
TTC39AQ5SRH9 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC30.7■■■□□ 2.51
TTC39AQ5SRH9 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
TTC39AQ5SRH9 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC30.68■■■□□ 2.5
TTC39AQ5SRH9 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC30.68■■■□□ 2.5
TTC39AQ5SRH9 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC30.68■■■□□ 2.5
TTC39AQ5SRH9 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
TTC39AQ5SRH9 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC30.67■■■□□ 2.5
TTC39AQ5SRH9 AC022413.1-201ENST00000624602 984 ntBASIC30.67■■■□□ 2.5
TTC39AQ5SRH9 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC30.66■■■□□ 2.5
TTC39AQ5SRH9 AC018358.1-201ENST00000631079 1402 ntBASIC30.65■■■□□ 2.5
TTC39AQ5SRH9 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC30.65■■■□□ 2.5
TTC39AQ5SRH9 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
TTC39AQ5SRH9 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
TTC39AQ5SRH9 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC30.64■■■□□ 2.49
TTC39AQ5SRH9 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
TTC39AQ5SRH9 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
TTC39AQ5SRH9 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC30.62■■■□□ 2.49
TTC39AQ5SRH9 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC30.62■■■□□ 2.49
TTC39AQ5SRH9 BRD4-212ENST00000630599 726 ntTSL 2 BASIC30.62■■■□□ 2.49
TTC39AQ5SRH9 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
TTC39AQ5SRH9 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC30.62■■■□□ 2.49
TTC39AQ5SRH9 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC30.62■■■□□ 2.49
TTC39AQ5SRH9 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC30.62■■■□□ 2.49
TTC39AQ5SRH9 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC30.61■■■□□ 2.49
TTC39AQ5SRH9 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC30.61■■■□□ 2.49
TTC39AQ5SRH9 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC30.61■■■□□ 2.49
TTC39AQ5SRH9 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
TTC39AQ5SRH9 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC30.61■■■□□ 2.49
TTC39AQ5SRH9 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC30.6■■■□□ 2.49
TTC39AQ5SRH9 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC30.6■■■□□ 2.49
TTC39AQ5SRH9 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC30.6■■■□□ 2.49
TTC39AQ5SRH9 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC30.6■■■□□ 2.49
TTC39AQ5SRH9 MED25-210ENST00000612854 801 ntTSL 5 BASIC30.6■■■□□ 2.49
TTC39AQ5SRH9 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
TTC39AQ5SRH9 MED25-214ENST00000622402 642 ntTSL 5 BASIC30.6■■■□□ 2.49
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms