Protein–RNA interactions for Protein: Q07457

BRE1, E3 ubiquitin-protein ligase BRE1, yeastyeast

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
BRE1Q07457 PFS2YNL317W 1398 nt8.74□□□□□ -1.01
BRE1Q07457 LEO1YOR123C 1395 nt8.74□□□□□ -1.01
BRE1Q07457 PDC5YLR134W 1692 nt8.74□□□□□ -1.01
BRE1Q07457 HSV2YGR223C 1347 nt8.74□□□□□ -1.01
BRE1Q07457 DOC1YGL240W 753 nt8.73□□□□□ -1.01
BRE1Q07457 HRB1YNL004W 1365 nt8.73□□□□□ -1.01
BRE1Q07457 YGL081WYGL081W 963 nt8.72□□□□□ -1.01
BRE1Q07457 CAR2YLR438W 1275 nt8.72□□□□□ -1.01
BRE1Q07457 DSC3YOR223W 879 nt8.72□□□□□ -1.01
BRE1Q07457 MSI1YBR195C 1269 nt8.72□□□□□ -1.01
BRE1Q07457 HDA1YNL021W 2121 nt8.71□□□□□ -1.01
BRE1Q07457 YEL034C-AYEL034C-A 603 nt8.71□□□□□ -1.02
BRE1Q07457 PRE5YMR314W 705 nt8.71□□□□□ -1.02
BRE1Q07457 SGF73YGL066W 1974 nt8.7□□□□□ -1.02
BRE1Q07457 SKP1YDR328C 585 nt8.7□□□□□ -1.02
BRE1Q07457 OPI1YHL020C 1215 nt8.7□□□□□ -1.02
BRE1Q07457 SNA3YJL151C 402 nt8.7□□□□□ -1.02
BRE1Q07457 HAL5YJL165C 2568 nt8.69□□□□□ -1.02
BRE1Q07457 MAS2YHR024C 1449 nt8.69□□□□□ -1.02
BRE1Q07457 CDC3YLR314C 1563 nt8.69□□□□□ -1.02
BRE1Q07457 BDS1YOL164W 1941 nt8.68□□□□□ -1.02
BRE1Q07457 PRY2YKR013W 990 nt8.68□□□□□ -1.02
BRE1Q07457 FIT1YDR534C 1587 nt8.68□□□□□ -1.02
BRE1Q07457 RUP1YOR138C 2016 nt8.68□□□□□ -1.02
BRE1Q07457 YKR023WYKR023W 1593 nt8.67□□□□□ -1.02
BRE1Q07457 ATP23YNR020C 813 nt8.67□□□□□ -1.02
BRE1Q07457 DAL7YIR031C 1665 nt8.66□□□□□ -1.02
BRE1Q07457 PIH1YHR034C 1035 nt8.66□□□□□ -1.02
BRE1Q07457 SNF7YLR025W 723 nt8.66□□□□□ -1.02
BRE1Q07457 YML079WYML079W 606 nt8.66□□□□□ -1.02
BRE1Q07457 MFG1YDL233W 1377 nt8.65□□□□□ -1.02
BRE1Q07457 SLM3YDL033C 1254 nt8.65□□□□□ -1.02
BRE1Q07457 ADH6YMR318C 1083 nt8.64□□□□□ -1.03
BRE1Q07457 PIL1YGR086C 1020 nt8.63□□□□□ -1.03
BRE1Q07457 YAH1YPL252C 519 nt8.63□□□□□ -1.03
BRE1Q07457 SDH8YBR269C 417 nt8.63□□□□□ -1.03
BRE1Q07457 CKI1YLR133W 1749 nt8.63□□□□□ -1.03
BRE1Q07457 YRF1-1YDR545W 5391 nt8.62□□□□□ -1.03
BRE1Q07457 YRF1-5YLR467W 5391 nt8.62□□□□□ -1.03
BRE1Q07457 YRF1-8YOR396W 5391 nt8.62□□□□□ -1.03
BRE1Q07457 SGV1YPR161C 1974 nt8.62□□□□□ -1.03
BRE1Q07457 YBL113CYBL113C 2379 nt8.61□□□□□ -1.03
BRE1Q07457 DPH5YLR172C 903 nt8.61□□□□□ -1.03
BRE1Q07457 YEN1YER041W 2280 nt8.6□□□□□ -1.03
BRE1Q07457 HNM1YGL077C 1692 nt8.6□□□□□ -1.03
BRE1Q07457 UFD1YGR048W 1086 nt8.6□□□□□ -1.03
BRE1Q07457 RTC2YBR147W 891 nt8.6□□□□□ -1.03
BRE1Q07457 SMC5YOL034W 3282 nt8.6□□□□□ -1.03
BRE1Q07457 TPI1YDR050C 747 nt8.59□□□□□ -1.03
BRE1Q07457 PUP2YGR253C 783 nt8.59□□□□□ -1.03
BRE1Q07457 RPR1RPR1 369 nt8.59□□□□□ -1.03
BRE1Q07457 YPL264CYPL264C 1062 nt8.59□□□□□ -1.03
BRE1Q07457 UME1YPL139C 1383 nt8.59□□□□□ -1.03
BRE1Q07457 YBL111CYBL111C 2004 nt8.58□□□□□ -1.04
BRE1Q07457 BIM1YER016W 1035 nt8.58□□□□□ -1.04
BRE1Q07457 CCW12YLR110C 402 nt8.58□□□□□ -1.04
BRE1Q07457 LPD1YFL018C 1500 nt8.57□□□□□ -1.04
BRE1Q07457 DCR2YLR361C 1737 nt8.57□□□□□ -1.04
BRE1Q07457 ERG24YNL280C 1317 nt8.56□□□□□ -1.04
BRE1Q07457 CIR2YOR356W 1896 nt8.56□□□□□ -1.04
BRE1Q07457 YAL019W-AYAL019W-A 570 nt8.56□□□□□ -1.04
BRE1Q07457 YML122CYML122C 381 nt8.56□□□□□ -1.04
BRE1Q07457 YDR327WYDR327W 327 nt8.55□□□□□ -1.04
BRE1Q07457 YJL213WYJL213W 996 nt8.55□□□□□ -1.04
BRE1Q07457 YOR300WYOR300W 309 nt8.55□□□□□ -1.04
BRE1Q07457 PAM17YKR065C 594 nt8.54□□□□□ -1.04
BRE1Q07457 PTH2YBL057C 627 nt8.54□□□□□ -1.04
BRE1Q07457 YPL067CYPL067C 597 nt8.54□□□□□ -1.04
BRE1Q07457 AFG3YER017C 2286 nt8.54□□□□□ -1.04
BRE1Q07457 TCB1YOR086C 3561 nt8.53□□□□□ -1.04
BRE1Q07457 YLR030WYLR030W 792 nt8.53□□□□□ -1.04
BRE1Q07457 YPQ1YOL092W 927 nt8.53□□□□□ -1.04
BRE1Q07457 HXT9YJL219W 1704 nt8.53□□□□□ -1.04
BRE1Q07457 GNA1YFL017C 480 nt8.52□□□□□ -1.05
BRE1Q07457 CYS3YAL012W 1185 nt8.52□□□□□ -1.05
BRE1Q07457 YPL247CYPL247C 1572 nt8.52□□□□□ -1.05
BRE1Q07457 TRR2YHR106W 1029 nt8.51□□□□□ -1.05
BRE1Q07457 HOG1YLR113W 1308 nt8.51□□□□□ -1.05
BRE1Q07457 YER152CYER152C 1332 nt8.5□□□□□ -1.05
BRE1Q07457 YOR041CYOR041C 432 nt8.49□□□□□ -1.05
BRE1Q07457 MBF1YOR298C-A 456 nt8.49□□□□□ -1.05
BRE1Q07457 CIT2YCR005C 1383 nt8.48□□□□□ -1.05
BRE1Q07457 CCR4YAL021C 2514 nt8.48□□□□□ -1.05
BRE1Q07457 MAL31YBR298C 1845 nt8.47□□□□□ -1.05
BRE1Q07457 LAT1YNL071W 1449 nt8.47□□□□□ -1.05
BRE1Q07457 PET117YER058W 324 nt8.47□□□□□ -1.05
BRE1Q07457 YGL260WYGL260W 231 nt8.47□□□□□ -1.05
BRE1Q07457 PRS4YBL068W 981 nt8.47□□□□□ -1.05
BRE1Q07457 CST26YBR042C 1194 nt8.47□□□□□ -1.05
BRE1Q07457 YKL147CYKL147C 618 nt8.46□□□□□ -1.06
BRE1Q07457 DML1YMR211W 1428 nt8.46□□□□□ -1.06
BRE1Q07457 YOX1YML027W 1158 nt8.45□□□□□ -1.06
BRE1Q07457 RDR1YOR380W 1641 nt8.44□□□□□ -1.06
BRE1Q07457 YPQ2YDR352W 954 nt8.44□□□□□ -1.06
BRE1Q07457 YHC3YJL059W 1227 nt8.44□□□□□ -1.06
BRE1Q07457 MSS51YLR203C 1311 nt8.44□□□□□ -1.06
BRE1Q07457 NFS1YCL017C 1494 nt8.44□□□□□ -1.06
BRE1Q07457 TOP3YLR234W 1971 nt8.43□□□□□ -1.06
BRE1Q07457 SUF3tG(CCC)D 72 nt8.43□□□□□ -1.06
BRE1Q07457 GTS1YGL181W 1191 nt8.43□□□□□ -1.06
Retrieved 100 of 7,029 protein–RNA pairs in 41 ms