Protein–RNA interactions for Protein: Q04839

GFD1, mRNA transport factor GFD1, yeastyeast

Known RBP Predictions only

Length 188 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
GFD1Q04839 ERR2YPL281C 1314 nt8.1□□□□□ -1.11
GFD1Q04839 tL(UAA)B1tL(UAA)B1 84 nt8.1□□□□□ -1.11
GFD1Q04839 tL(UAA)B2tL(UAA)B2 84 nt8.1□□□□□ -1.11
GFD1Q04839 tL(UAA)DtL(UAA)D 84 nt8.1□□□□□ -1.11
GFD1Q04839 SUP51tL(UAA)J 84 nt8.1□□□□□ -1.11
GFD1Q04839 tL(UAA)KtL(UAA)K 84 nt8.1□□□□□ -1.11
GFD1Q04839 tL(UAA)LtL(UAA)L 84 nt8.1□□□□□ -1.11
GFD1Q04839 tL(UAA)NtL(UAA)N 84 nt8.1□□□□□ -1.11
GFD1Q04839 DSC3YOR223W 879 nt8.1□□□□□ -1.11
GFD1Q04839 PAU21YOR394W 495 nt8.1□□□□□ -1.11
GFD1Q04839 PAU22YPL282C 495 nt8.1□□□□□ -1.11
GFD1Q04839 RTG2YGL252C 1767 nt8.1□□□□□ -1.11
GFD1Q04839 TOS1YBR162C 1368 nt8.1□□□□□ -1.11
GFD1Q04839 BAP3YDR046C 1815 nt8.09□□□□□ -1.11
GFD1Q04839 PRY2YKR013W 990 nt8.09□□□□□ -1.11
GFD1Q04839 YMR253CYMR253C 1245 nt8.09□□□□□ -1.11
GFD1Q04839 TOP3YLR234W 1971 nt8.08□□□□□ -1.12
GFD1Q04839 AFG3YER017C 2286 nt8.08□□□□□ -1.12
GFD1Q04839 YGL260WYGL260W 231 nt8.08□□□□□ -1.12
GFD1Q04839 HRA1HRA1 564 nt8.08□□□□□ -1.12
GFD1Q04839 OSM1YJR051W 1506 nt8.08□□□□□ -1.12
GFD1Q04839 YDR476CYDR476C 675 nt8.07□□□□□ -1.12
GFD1Q04839 YJR154WYJR154W 1041 nt8.07□□□□□ -1.12
GFD1Q04839 RMD8YFR048W 1989 nt8.06□□□□□ -1.12
GFD1Q04839 CRN1YLR429W 1956 nt8.06□□□□□ -1.12
GFD1Q04839 RPL12BYDR418W 498 nt8.06□□□□□ -1.12
GFD1Q04839 YKL147CYKL147C 618 nt8.06□□□□□ -1.12
GFD1Q04839 FLC2YAL053W 2352 nt8.06□□□□□ -1.12
GFD1Q04839 PRB1YEL060C 1908 nt8.05□□□□□ -1.12
GFD1Q04839 SKP1YDR328C 585 nt8.05□□□□□ -1.12
GFD1Q04839 NCA3YJL116C 1014 nt8.05□□□□□ -1.12
GFD1Q04839 YJR142WYJR142W 1029 nt8.05□□□□□ -1.12
GFD1Q04839 LIP5YOR196C 1245 nt8.05□□□□□ -1.12
GFD1Q04839 CAN1YEL063C 1773 nt8.05□□□□□ -1.12
GFD1Q04839 GNP1YDR508C 1992 nt8.04□□□□□ -1.12
GFD1Q04839 SEC24YIL109C 2781 nt8.03□□□□□ -1.12
GFD1Q04839 ALR1YOL130W 2580 nt8.02□□□□□ -1.13
GFD1Q04839 HRB1YNL004W 1365 nt8.02□□□□□ -1.13
GFD1Q04839 YER137CYER137C 447 nt8.02□□□□□ -1.13
GFD1Q04839 FUS3YBL016W 1062 nt8.02□□□□□ -1.13
GFD1Q04839 POB3YML069W 1659 nt8.02□□□□□ -1.13
GFD1Q04839 TOD6YBL054W 1578 nt8.01□□□□□ -1.13
GFD1Q04839 YOR343CYOR343C 327 nt8.01□□□□□ -1.13
GFD1Q04839 NMA2YGR010W 1188 nt8□□□□□ -1.13
GFD1Q04839 GCD11YER025W 1584 nt8□□□□□ -1.13
GFD1Q04839 YGL081WYGL081W 963 nt7.99□□□□□ -1.13
GFD1Q04839 MSI1YBR195C 1269 nt7.99□□□□□ -1.13
GFD1Q04839 AQR1YNL065W 1761 nt7.98□□□□□ -1.13
GFD1Q04839 FCY2YER056C 1602 nt7.98□□□□□ -1.13
GFD1Q04839 PIL1YGR086C 1020 nt7.97□□□□□ -1.13
GFD1Q04839 CCW12YLR110C 402 nt7.97□□□□□ -1.13
GFD1Q04839 PET494YNR045W 1470 nt7.97□□□□□ -1.13
GFD1Q04839 ENB1YOL158C 1821 nt7.96□□□□□ -1.13
GFD1Q04839 NUP57YGR119C 1626 nt7.96□□□□□ -1.13
GFD1Q04839 RDR1YOR380W 1641 nt7.96□□□□□ -1.13
GFD1Q04839 YJL213WYJL213W 996 nt7.96□□□□□ -1.14
GFD1Q04839 SNU66YOR308C 1764 nt7.96□□□□□ -1.14
GFD1Q04839 CDC3YLR314C 1563 nt7.95□□□□□ -1.14
GFD1Q04839 ADE2YOR128C 1716 nt7.95□□□□□ -1.14
GFD1Q04839 CDC7YDL017W 1524 nt7.93□□□□□ -1.14
GFD1Q04839 SUF3tG(CCC)D 72 nt7.93□□□□□ -1.14
GFD1Q04839 BUD20YLR074C 501 nt7.93□□□□□ -1.14
GFD1Q04839 BNA3YJL060W 1335 nt7.93□□□□□ -1.14
GFD1Q04839 EXG2YDR261C 1689 nt7.92□□□□□ -1.14
GFD1Q04839 LOT6YLR011W 576 nt7.92□□□□□ -1.14
GFD1Q04839 YLR358CYLR358C 564 nt7.92□□□□□ -1.14
GFD1Q04839 YMR074CYMR074C 438 nt7.92□□□□□ -1.14
GFD1Q04839 Q0010Q0010 387 nt7.92□□□□□ -1.14
GFD1Q04839 DOC1YGL240W 753 nt7.91□□□□□ -1.14
GFD1Q04839 PGI1YBR196C 1665 nt7.89□□□□□ -1.15
GFD1Q04839 YDR510C-AYDR510C-A 117 nt7.89□□□□□ -1.15
GFD1Q04839 PET117YER058W 324 nt7.89□□□□□ -1.15
GFD1Q04839 YNR001W-AYNR001W-A 219 nt7.89□□□□□ -1.15
GFD1Q04839 MAS2YHR024C 1449 nt7.88□□□□□ -1.15
GFD1Q04839 GGC1YDL198C 903 nt7.88□□□□□ -1.15
GFD1Q04839 YAL016C-AYAL016C-A 315 nt7.88□□□□□ -1.15
GFD1Q04839 CIT2YCR005C 1383 nt7.87□□□□□ -1.15
GFD1Q04839 SNF4YGL115W 969 nt7.87□□□□□ -1.15
GFD1Q04839 KAE1YKR038C 1161 nt7.87□□□□□ -1.15
GFD1Q04839 PAM17YKR065C 594 nt7.87□□□□□ -1.15
GFD1Q04839 SDH8YBR269C 417 nt7.87□□□□□ -1.15
GFD1Q04839 MAM3YOL060C 2121 nt7.87□□□□□ -1.15
GFD1Q04839 YCR041WYCR041W 333 nt7.86□□□□□ -1.15
GFD1Q04839 YML122CYML122C 381 nt7.86□□□□□ -1.15
GFD1Q04839 ADH6YMR318C 1083 nt7.86□□□□□ -1.15
GFD1Q04839 RPL43AYPR043W 279 nt7.86□□□□□ -1.15
GFD1Q04839 SUN4YNL066W 1263 nt7.85□□□□□ -1.15
GFD1Q04839 MHP1YJL042W 4197 nt7.85□□□□□ -1.15
GFD1Q04839 ECM10YEL030W 1935 nt7.84□□□□□ -1.15
GFD1Q04839 ERG27YLR100W 1044 nt7.84□□□□□ -1.15
GFD1Q04839 RFS1YBR052C 633 nt7.84□□□□□ -1.15
GFD1Q04839 PHO85YPL031C 918 nt7.83□□□□□ -1.16
GFD1Q04839 DMC1YER179W 1005 nt7.82□□□□□ -1.16
GFD1Q04839 AIM2YAL049C 741 nt7.82□□□□□ -1.16
GFD1Q04839 YLR112WYLR112W 420 nt7.82□□□□□ -1.16
GFD1Q04839 ATP23YNR020C 813 nt7.82□□□□□ -1.16
GFD1Q04839 YOR012WYOR012W 414 nt7.82□□□□□ -1.16
GFD1Q04839 DPM1YPR183W 804 nt7.82□□□□□ -1.16
GFD1Q04839 FRT1YOR324C 1809 nt7.81□□□□□ -1.16
GFD1Q04839 YPR127WYPR127W 1038 nt7.8□□□□□ -1.16
Retrieved 100 of 7,029 protein–RNA pairs in 19.7 ms