Protein–RNA interactions for Protein: Q00578

SSL2, General transcription and DNA repair factor IIH helicase subunit XPB, yeastyeast

Predictions only

Length 843 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSL2Q00578 ADA2YDR448W 1305 nt8.28□□□□□ -1.08
SSL2Q00578 YKL147CYKL147C 618 nt8.27□□□□□ -1.09
SSL2Q00578 YAH1YPL252C 519 nt8.26□□□□□ -1.09
SSL2Q00578 SPS1YDR523C 1473 nt8.26□□□□□ -1.09
SSL2Q00578 FCY2YER056C 1602 nt8.25□□□□□ -1.09
SSL2Q00578 OPI1YHL020C 1215 nt8.25□□□□□ -1.09
SSL2Q00578 MFT1YML062C 1179 nt8.25□□□□□ -1.09
SSL2Q00578 LIP5YOR196C 1245 nt8.25□□□□□ -1.09
SSL2Q00578 YMR007WYMR007W 381 nt8.24□□□□□ -1.09
SSL2Q00578 INP54YOL065C 1155 nt8.24□□□□□ -1.09
SSL2Q00578 PPZ2YDR436W 2133 nt8.23□□□□□ -1.09
SSL2Q00578 PRY2YKR013W 990 nt8.22□□□□□ -1.09
SSL2Q00578 CAN1YEL063C 1773 nt8.22□□□□□ -1.09
SSL2Q00578 RTG2YGL252C 1767 nt8.22□□□□□ -1.09
SSL2Q00578 CTF3YLR381W 2202 nt8.22□□□□□ -1.09
SSL2Q00578 ELP4YPL101W 1371 nt8.22□□□□□ -1.09
SSL2Q00578 NUP57YGR119C 1626 nt8.21□□□□□ -1.1
SSL2Q00578 RDR1YOR380W 1641 nt8.21□□□□□ -1.1
SSL2Q00578 TDH1YJL052W 999 nt8.2□□□□□ -1.1
SSL2Q00578 NCA3YJL116C 1014 nt8.2□□□□□ -1.1
SSL2Q00578 LOT6YLR011W 576 nt8.2□□□□□ -1.1
SSL2Q00578 RTC2YBR147W 891 nt8.2□□□□□ -1.1
SSL2Q00578 MAS2YHR024C 1449 nt8.2□□□□□ -1.1
SSL2Q00578 HAC1YFL031W 717 nt8.19□□□□□ -1.1
SSL2Q00578 PNS1YOR161C 1620 nt8.18□□□□□ -1.1
SSL2Q00578 YNR001W-AYNR001W-A 219 nt8.18□□□□□ -1.1
SSL2Q00578 SPR1YOR190W 1338 nt8.18□□□□□ -1.1
SSL2Q00578 YHR131CYHR131C 2553 nt8.17□□□□□ -1.1
SSL2Q00578 PSP2YML017W 1782 nt8.17□□□□□ -1.1
SSL2Q00578 PSA1YDL055C 1086 nt8.17□□□□□ -1.1
SSL2Q00578 YLR173WYLR173W 1827 nt8.17□□□□□ -1.1
SSL2Q00578 GET2YER083C 858 nt8.16□□□□□ -1.1
SSL2Q00578 ADE5,7YGL234W 2409 nt8.16□□□□□ -1.1
SSL2Q00578 RFS1YBR052C 633 nt8.16□□□□□ -1.1
SSL2Q00578 YOR012WYOR012W 414 nt8.15□□□□□ -1.1
SSL2Q00578 YBL111CYBL111C 2004 nt8.14□□□□□ -1.11
SSL2Q00578 GCD11YER025W 1584 nt8.14□□□□□ -1.11
SSL2Q00578 YDR327WYDR327W 327 nt8.13□□□□□ -1.11
SSL2Q00578 ERV2YPR037C 591 nt8.13□□□□□ -1.11
SSL2Q00578 PPS1YBR276C 2424 nt8.13□□□□□ -1.11
SSL2Q00578 ECM10YEL030W 1935 nt8.13□□□□□ -1.11
SSL2Q00578 YIL108WYIL108W 2091 nt8.12□□□□□ -1.11
SSL2Q00578 PAB1YER165W 1734 nt8.12□□□□□ -1.11
SSL2Q00578 PGI1YBR196C 1665 nt8.12□□□□□ -1.11
SSL2Q00578 SKP1YDR328C 585 nt8.11□□□□□ -1.11
SSL2Q00578 CBK1YNL161W 2271 nt8.1□□□□□ -1.11
SSL2Q00578 CRN1YLR429W 1956 nt8.1□□□□□ -1.11
SSL2Q00578 CDC7YDL017W 1524 nt8.1□□□□□ -1.11
SSL2Q00578 CPT1YNL130C 1182 nt8.1□□□□□ -1.11
SSL2Q00578 SNF4YGL115W 969 nt8.09□□□□□ -1.11
SSL2Q00578 TAD2YJL035C 753 nt8.09□□□□□ -1.11
SSL2Q00578 ADE1YAR015W 921 nt8.09□□□□□ -1.11
SSL2Q00578 YPT10YBR264C 600 nt8.09□□□□□ -1.11
SSL2Q00578 ERG24YNL280C 1317 nt8.08□□□□□ -1.12
SSL2Q00578 SEC23YPR181C 2307 nt8.08□□□□□ -1.12
SSL2Q00578 NUP53YMR153W 1428 nt8.07□□□□□ -1.12
SSL2Q00578 NAS6YGR232W 687 nt8.07□□□□□ -1.12
SSL2Q00578 YMR074CYMR074C 438 nt8.07□□□□□ -1.12
SSL2Q00578 DSC3YOR223W 879 nt8.07□□□□□ -1.12
SSL2Q00578 NDE1YMR145C 1683 nt8.07□□□□□ -1.12
SSL2Q00578 HHY1YEL059W 309 nt8.06□□□□□ -1.12
SSL2Q00578 YJR142WYJR142W 1029 nt8.06□□□□□ -1.12
SSL2Q00578 ERG27YLR100W 1044 nt8.06□□□□□ -1.12
SSL2Q00578 RCR1YBR005W 642 nt8.06□□□□□ -1.12
SSL2Q00578 EFM1YHL039W 1758 nt8.06□□□□□ -1.12
SSL2Q00578 GDH1YOR375C 1365 nt8.06□□□□□ -1.12
SSL2Q00578 GPH1YPR160W 2709 nt8.06□□□□□ -1.12
SSL2Q00578 SRF1YDL133W 1314 nt8.04□□□□□ -1.12
SSL2Q00578 ECM27YJR106W 2178 nt8.04□□□□□ -1.12
SSL2Q00578 DMC1YER179W 1005 nt8.04□□□□□ -1.12
SSL2Q00578 HRA1HRA1 564 nt8.04□□□□□ -1.12
SSL2Q00578 PHO85YPL031C 918 nt8.04□□□□□ -1.12
SSL2Q00578 NMA2YGR010W 1188 nt8.03□□□□□ -1.12
SSL2Q00578 YEL009C-AYEL009C-A 408 nt8.02□□□□□ -1.13
SSL2Q00578 CCW12YLR110C 402 nt8.02□□□□□ -1.13
SSL2Q00578 YLR112WYLR112W 420 nt8.02□□□□□ -1.13
SSL2Q00578 CDC13YDL220C 2775 nt8.02□□□□□ -1.13
SSL2Q00578 HRB1YNL004W 1365 nt8.01□□□□□ -1.13
SSL2Q00578 YCR041WYCR041W 333 nt8.01□□□□□ -1.13
SSL2Q00578 YGR068W-AYGR068W-A 96 nt8.01□□□□□ -1.13
SSL2Q00578 OSM1YJR051W 1506 nt8.01□□□□□ -1.13
SSL2Q00578 CDC3YLR314C 1563 nt8.01□□□□□ -1.13
SSL2Q00578 CTA1YDR256C 1548 nt8□□□□□ -1.13
SSL2Q00578 GRH1YDR517W 1119 nt8□□□□□ -1.13
SSL2Q00578 tL(UAA)B1tL(UAA)B1 84 nt8□□□□□ -1.13
SSL2Q00578 tL(UAA)B2tL(UAA)B2 84 nt8□□□□□ -1.13
SSL2Q00578 tL(UAA)DtL(UAA)D 84 nt8□□□□□ -1.13
SSL2Q00578 SUP51tL(UAA)J 84 nt8□□□□□ -1.13
SSL2Q00578 tL(UAA)KtL(UAA)K 84 nt8□□□□□ -1.13
SSL2Q00578 tL(UAA)LtL(UAA)L 84 nt8□□□□□ -1.13
SSL2Q00578 tL(UAA)NtL(UAA)N 84 nt8□□□□□ -1.13
SSL2Q00578 PAC10YGR078C 600 nt8□□□□□ -1.13
SSL2Q00578 ADH6YMR318C 1083 nt8□□□□□ -1.13
SSL2Q00578 YNL040WYNL040W 1371 nt7.99□□□□□ -1.13
SSL2Q00578 KIN1YDR122W 3195 nt7.99□□□□□ -1.13
SSL2Q00578 FCP1YMR277W 2199 nt7.98□□□□□ -1.13
SSL2Q00578 YOR389WYOR389W 1875 nt7.98□□□□□ -1.13
SSL2Q00578 STS1YIR011C 960 nt7.98□□□□□ -1.13
SSL2Q00578 SUN4YNL066W 1263 nt7.98□□□□□ -1.13
SSL2Q00578 MRP1YDR347W 966 nt7.97□□□□□ -1.13
Retrieved 100 of 7,029 protein–RNA pairs in 11.3 ms