Protein–RNA interactions for Protein: P53044

UFD1, Ubiquitin fusion degradation protein 1, yeastyeast

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UFD1P53044 CPR2YHR057C 618 nt6.53□□□□□ -1.36
UFD1P53044 RCF2YNR018W 675 nt6.53□□□□□ -1.36
UFD1P53044 YOR041CYOR041C 432 nt6.53□□□□□ -1.36
UFD1P53044 YOR343CYOR343C 327 nt6.53□□□□□ -1.36
UFD1P53044 PAU21YOR394W 495 nt6.53□□□□□ -1.36
UFD1P53044 PAU22YPL282C 495 nt6.53□□□□□ -1.36
UFD1P53044 ASN2YGR124W 1719 nt6.53□□□□□ -1.36
UFD1P53044 PRB1YEL060C 1908 nt6.52□□□□□ -1.37
UFD1P53044 UTR5YEL035C 501 nt6.52□□□□□ -1.37
UFD1P53044 HAM1YJR069C 594 nt6.52□□□□□ -1.37
UFD1P53044 PPS1YBR276C 2424 nt6.52□□□□□ -1.37
UFD1P53044 LEO1YOR123C 1395 nt6.52□□□□□ -1.37
UFD1P53044 YOR389WYOR389W 1875 nt6.51□□□□□ -1.37
UFD1P53044 SNF7YLR025W 723 nt6.51□□□□□ -1.37
UFD1P53044 CDC23YHR166C 1881 nt6.51□□□□□ -1.37
UFD1P53044 SSC1YJR045C 1965 nt6.51□□□□□ -1.37
UFD1P53044 BNA3YJL060W 1335 nt6.5□□□□□ -1.37
UFD1P53044 YOS9YDR057W 1629 nt6.5□□□□□ -1.37
UFD1P53044 GDH1YOR375C 1365 nt6.5□□□□□ -1.37
UFD1P53044 DCR2YLR361C 1737 nt6.5□□□□□ -1.37
UFD1P53044 YBL113CYBL113C 2379 nt6.5□□□□□ -1.37
UFD1P53044 YHR033WYHR033W 1272 nt6.49□□□□□ -1.37
UFD1P53044 SNA3YJL151C 402 nt6.49□□□□□ -1.37
UFD1P53044 PET10YKR046C 852 nt6.49□□□□□ -1.37
UFD1P53044 ADA2YDR448W 1305 nt6.49□□□□□ -1.37
UFD1P53044 TOD6YBL054W 1578 nt6.48□□□□□ -1.37
UFD1P53044 SEC24YIL109C 2781 nt6.48□□□□□ -1.37
UFD1P53044 YIL168WYIL168W 384 nt6.48□□□□□ -1.37
UFD1P53044 TAD2YJL035C 753 nt6.48□□□□□ -1.37
UFD1P53044 TDH1YJL052W 999 nt6.48□□□□□ -1.37
UFD1P53044 RTC2YBR147W 891 nt6.48□□□□□ -1.37
UFD1P53044 ERG12YMR208W 1332 nt6.48□□□□□ -1.37
UFD1P53044 YIP4YGL198W 708 nt6.47□□□□□ -1.37
UFD1P53044 YJL043WYJL043W 774 nt6.47□□□□□ -1.37
UFD1P53044 YAL016C-AYAL016C-A 315 nt6.47□□□□□ -1.37
UFD1P53044 TCB1YOR086C 3561 nt6.47□□□□□ -1.37
UFD1P53044 TPI1YDR050C 747 nt6.46□□□□□ -1.38
UFD1P53044 VPS65YLR322W 315 nt6.46□□□□□ -1.38
UFD1P53044 CAN1YEL063C 1773 nt6.46□□□□□ -1.38
UFD1P53044 YGR068W-AYGR068W-A 96 nt6.45□□□□□ -1.38
UFD1P53044 ELP4YPL101W 1371 nt6.44□□□□□ -1.38
UFD1P53044 RMD8YFR048W 1989 nt6.44□□□□□ -1.38
UFD1P53044 STE3YKL178C 1413 nt6.44□□□□□ -1.38
UFD1P53044 YDR215CYDR215C 414 nt6.44□□□□□ -1.38
UFD1P53044 ECM30YLR436C 3825 nt6.44□□□□□ -1.38
UFD1P53044 ERV25YML012W 636 nt6.43□□□□□ -1.38
UFD1P53044 MSS51YLR203C 1311 nt6.43□□□□□ -1.38
UFD1P53044 DAL7YIR031C 1665 nt6.42□□□□□ -1.38
UFD1P53044 CAR2YLR438W 1275 nt6.42□□□□□ -1.38
UFD1P53044 YNR001W-AYNR001W-A 219 nt6.42□□□□□ -1.38
UFD1P53044 HNM1YGL077C 1692 nt6.42□□□□□ -1.38
UFD1P53044 FLC2YAL053W 2352 nt6.42□□□□□ -1.38
UFD1P53044 YNL295WYNL295W 1575 nt6.4□□□□□ -1.38
UFD1P53044 PSP2YML017W 1782 nt6.4□□□□□ -1.38
UFD1P53044 RFS1YBR052C 633 nt6.4□□□□□ -1.38
UFD1P53044 YPC1YBR183W 951 nt6.4□□□□□ -1.38
UFD1P53044 PUS7YOR243C 2031 nt6.4□□□□□ -1.39
UFD1P53044 CIR2YOR356W 1896 nt6.39□□□□□ -1.39
UFD1P53044 RRP43YCR035C 1185 nt6.39□□□□□ -1.39
UFD1P53044 DAL80YKR034W 810 nt6.39□□□□□ -1.39
UFD1P53044 NUP53YMR153W 1428 nt6.39□□□□□ -1.39
UFD1P53044 VBA5YKR105C 1749 nt6.39□□□□□ -1.39
UFD1P53044 YDR327WYDR327W 327 nt6.38□□□□□ -1.39
UFD1P53044 tL(UAA)B1tL(UAA)B1 84 nt6.38□□□□□ -1.39
UFD1P53044 tL(UAA)B2tL(UAA)B2 84 nt6.38□□□□□ -1.39
UFD1P53044 tL(UAA)DtL(UAA)D 84 nt6.38□□□□□ -1.39
UFD1P53044 SUP51tL(UAA)J 84 nt6.38□□□□□ -1.39
UFD1P53044 tL(UAA)KtL(UAA)K 84 nt6.38□□□□□ -1.39
UFD1P53044 tL(UAA)LtL(UAA)L 84 nt6.38□□□□□ -1.39
UFD1P53044 tL(UAA)NtL(UAA)N 84 nt6.38□□□□□ -1.39
UFD1P53044 INP54YOL065C 1155 nt6.38□□□□□ -1.39
UFD1P53044 SPR1YOR190W 1338 nt6.38□□□□□ -1.39
UFD1P53044 ENB1YOL158C 1821 nt6.38□□□□□ -1.39
UFD1P53044 YEN1YER041W 2280 nt6.38□□□□□ -1.39
UFD1P53044 ADE1YAR015W 921 nt6.37□□□□□ -1.39
UFD1P53044 YML034C-AYML034C-A 399 nt6.37□□□□□ -1.39
UFD1P53044 CPT1YNL130C 1182 nt6.37□□□□□ -1.39
UFD1P53044 YAH1YPL252C 519 nt6.37□□□□□ -1.39
UFD1P53044 YDR476CYDR476C 675 nt6.36□□□□□ -1.39
UFD1P53044 PRY2YKR013W 990 nt6.36□□□□□ -1.39
UFD1P53044 MEU1YLR017W 1014 nt6.36□□□□□ -1.39
UFD1P53044 PNS1YOR161C 1620 nt6.36□□□□□ -1.39
UFD1P53044 PPZ2YDR436W 2133 nt6.35□□□□□ -1.39
UFD1P53044 EDC2YER035W 438 nt6.35□□□□□ -1.39
UFD1P53044 OPI1YHL020C 1215 nt6.35□□□□□ -1.39
UFD1P53044 YLL058WYLL058W 1728 nt6.35□□□□□ -1.39
UFD1P53044 DAL4YIR028W 1908 nt6.35□□□□□ -1.39
UFD1P53044 ECM27YJR106W 2178 nt6.34□□□□□ -1.39
UFD1P53044 GET2YER083C 858 nt6.34□□□□□ -1.39
UFD1P53044 FUS3YBL016W 1062 nt6.34□□□□□ -1.39
UFD1P53044 BDS1YOL164W 1941 nt6.34□□□□□ -1.39
UFD1P53044 TOS1YBR162C 1368 nt6.33□□□□□ -1.4
UFD1P53044 EMP65YER140W 1671 nt6.33□□□□□ -1.4
UFD1P53044 YCR041WYCR041W 333 nt6.33□□□□□ -1.4
UFD1P53044 HAC1YFL031W 717 nt6.33□□□□□ -1.4
UFD1P53044 YGL260WYGL260W 231 nt6.33□□□□□ -1.4
UFD1P53044 LOT6YLR011W 576 nt6.33□□□□□ -1.4
UFD1P53044 FCY2YER056C 1602 nt6.32□□□□□ -1.4
UFD1P53044 YKL147CYKL147C 618 nt6.32□□□□□ -1.4
UFD1P53044 YOR268CYOR268C 399 nt6.32□□□□□ -1.4
Retrieved 100 of 7,029 protein–RNA pairs in 13.6 ms