Protein–RNA interactions for Protein: P43588

RPN11, Ubiquitin carboxyl-terminal hydrolase RPN11, yeastyeast

Known RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN11P43588 YML018CYML018C 1182 nt9.01□□□□□ -0.97
RPN11P43588 WSC4YHL028W 1818 nt9.01□□□□□ -0.97
RPN11P43588 RRP9YPR137W 1722 nt9□□□□□ -0.97
RPN11P43588 COQ3YOL096C 939 nt9□□□□□ -0.97
RPN11P43588 CCW12YLR110C 402 nt8.99□□□□□ -0.97
RPN11P43588 FSF1YOR271C 984 nt8.99□□□□□ -0.97
RPN11P43588 ASR1YPR093C 867 nt8.99□□□□□ -0.97
RPN11P43588 YIP4YGL198W 708 nt8.98□□□□□ -0.97
RPN11P43588 FPR3YML074C 1236 nt8.98□□□□□ -0.97
RPN11P43588 OSW2YLR054C 2175 nt8.97□□□□□ -0.97
RPN11P43588 MRP7YNL005C 1116 nt8.97□□□□□ -0.97
RPN11P43588 RTC4YNL254C 1206 nt8.97□□□□□ -0.97
RPN11P43588 MRPS18YNL306W 654 nt8.97□□□□□ -0.97
RPN11P43588 ADE5,7YGL234W 2409 nt8.97□□□□□ -0.97
RPN11P43588 YLR361C-AYLR361C-A 297 nt8.96□□□□□ -0.98
RPN11P43588 AOS1YPR180W 1044 nt8.96□□□□□ -0.98
RPN11P43588 CIT2YCR005C 1383 nt8.95□□□□□ -0.98
RPN11P43588 BDS1YOL164W 1941 nt8.95□□□□□ -0.98
RPN11P43588 YNL092WYNL092W 1203 nt8.94□□□□□ -0.98
RPN11P43588 TGL5YOR081C 2250 nt8.94□□□□□ -0.98
RPN11P43588 HTZ1YOL012C 405 nt8.93□□□□□ -0.98
RPN11P43588 LSC1YOR142W 990 nt8.93□□□□□ -0.98
RPN11P43588 MPE1YKL059C 1326 nt8.93□□□□□ -0.98
RPN11P43588 CDC1YDR182W 1476 nt8.93□□□□□ -0.98
RPN11P43588 YLR072WYLR072W 2082 nt8.92□□□□□ -0.98
RPN11P43588 HAM1YJR069C 594 nt8.92□□□□□ -0.98
RPN11P43588 TAF9YMR236W 474 nt8.92□□□□□ -0.98
RPN11P43588 MTO1YGL236C 2010 nt8.92□□□□□ -0.98
RPN11P43588 ADE16YLR028C 1776 nt8.91□□□□□ -0.98
RPN11P43588 YHR033WYHR033W 1272 nt8.91□□□□□ -0.98
RPN11P43588 DAL80YKR034W 810 nt8.91□□□□□ -0.98
RPN11P43588 PLB2YMR006C 2121 nt8.91□□□□□ -0.98
RPN11P43588 RNH201YNL072W 924 nt8.91□□□□□ -0.98
RPN11P43588 HIS3YOR202W 663 nt8.91□□□□□ -0.98
RPN11P43588 APE4YHR113W 1473 nt8.9□□□□□ -0.98
RPN11P43588 GCG1YER163C 699 nt8.9□□□□□ -0.98
RPN11P43588 TFG2YGR005C 1203 nt8.9□□□□□ -0.98
RPN11P43588 PRE3YJL001W 648 nt8.9□□□□□ -0.98
RPN11P43588 ASF1YJL115W 840 nt8.9□□□□□ -0.98
RPN11P43588 MTC6YHR151C 1581 nt8.9□□□□□ -0.99
RPN11P43588 YPC1YBR183W 951 nt8.89□□□□□ -0.99
RPN11P43588 TRP2YER090W 1524 nt8.89□□□□□ -0.99
RPN11P43588 ELP6YMR312W 822 nt8.87□□□□□ -0.99
RPN11P43588 ABP1YCR088W 1779 nt8.86□□□□□ -0.99
RPN11P43588 FRE6YLL051C 2139 nt8.86□□□□□ -0.99
RPN11P43588 FMO1YHR176W 1299 nt8.86□□□□□ -0.99
RPN11P43588 ORT1YOR130C 879 nt8.86□□□□□ -0.99
RPN11P43588 MRN1YPL184C 1839 nt8.85□□□□□ -0.99
RPN11P43588 INM1YHR046C 888 nt8.85□□□□□ -0.99
RPN11P43588 YMR122CYMR122C 375 nt8.85□□□□□ -0.99
RPN11P43588 TDH2YJR009C 999 nt8.84□□□□□ -0.99
RPN11P43588 YNR005CYNR005C 405 nt8.84□□□□□ -0.99
RPN11P43588 HXT10YFL011W 1641 nt8.83□□□□□ -1
RPN11P43588 PEX28YHR150W 1740 nt8.83□□□□□ -1
RPN11P43588 YRF1-3YGR296W 5580 nt8.83□□□□□ -1
RPN11P43588 YRF1-6YNL339C 5580 nt8.83□□□□□ -1
RPN11P43588 YRF1-7YPL283C 5580 nt8.83□□□□□ -1
RPN11P43588 PEX3YDR329C 1326 nt8.82□□□□□ -1
RPN11P43588 BEM1YBR200W 1656 nt8.82□□□□□ -1
RPN11P43588 RAD59YDL059C 717 nt8.82□□□□□ -1
RPN11P43588 UIP4YPL186C 915 nt8.82□□□□□ -1
RPN11P43588 ERV25YML012W 636 nt8.81□□□□□ -1
RPN11P43588 TAE1YBR261C 699 nt8.81□□□□□ -1
RPN11P43588 YDR215CYDR215C 414 nt8.8□□□□□ -1
RPN11P43588 NME1NME1 340 nt8.8□□□□□ -1
RPN11P43588 ADH5YBR145W 1056 nt8.79□□□□□ -1
RPN11P43588 BRN1YBL097W 2265 nt8.79□□□□□ -1
RPN11P43588 YDR187CYDR187C 519 nt8.78□□□□□ -1
RPN11P43588 RPS28AYOR167C 204 nt8.78□□□□□ -1
RPN11P43588 ERG8YMR220W 1356 nt8.77□□□□□ -1.01
RPN11P43588 YLR157W-EYLR157W-E 165 nt8.77□□□□□ -1.01
RPN11P43588 YBR113WYBR113W 483 nt8.77□□□□□ -1.01
RPN11P43588 YCR049CYCR049C 447 nt8.76□□□□□ -1.01
RPN11P43588 HIS1YER055C 894 nt8.76□□□□□ -1.01
RPN11P43588 YMR295CYMR295C 594 nt8.76□□□□□ -1.01
RPN11P43588 YNL097W-AYNL097W-A 156 nt8.76□□□□□ -1.01
RPN11P43588 YNL140CYNL140C 570 nt8.76□□□□□ -1.01
RPN11P43588 MAM3YOL060C 2121 nt8.76□□□□□ -1.01
RPN11P43588 LEA1YPL213W 717 nt8.76□□□□□ -1.01
RPN11P43588 NUP49YGL172W 1419 nt8.76□□□□□ -1.01
RPN11P43588 PET117YER058W 324 nt8.75□□□□□ -1.01
RPN11P43588 MSP1YGR028W 1089 nt8.75□□□□□ -1.01
RPN11P43588 THI6YPL214C 1623 nt8.75□□□□□ -1.01
RPN11P43588 CDA1YLR307W 906 nt8.74□□□□□ -1.01
RPN11P43588 LYS21YDL131W 1323 nt8.74□□□□□ -1.01
RPN11P43588 ERR1YOR393W 1314 nt8.74□□□□□ -1.01
RPN11P43588 ERR2YPL281C 1314 nt8.74□□□□□ -1.01
RPN11P43588 SEN34YAR008W 828 nt8.73□□□□□ -1.01
RPN11P43588 TSR2YLR435W 618 nt8.73□□□□□ -1.01
RPN11P43588 ADE2YOR128C 1716 nt8.72□□□□□ -1.01
RPN11P43588 OM45YIL136W 1182 nt8.72□□□□□ -1.01
RPN11P43588 ZRT2YLR130C 1269 nt8.71□□□□□ -1.02
RPN11P43588 KTR4YBR199W 1395 nt8.71□□□□□ -1.02
RPN11P43588 ZWF1YNL241C 1518 nt8.7□□□□□ -1.02
RPN11P43588 SNN1YNL086W 309 nt8.7□□□□□ -1.02
RPN11P43588 VMA3YEL027W 483 nt8.69□□□□□ -1.02
RPN11P43588 CUP2YGL166W 678 nt8.68□□□□□ -1.02
RPN11P43588 YOL099CYOL099C 492 nt8.68□□□□□ -1.02
RPN11P43588 YBR027CYBR027C 333 nt8.68□□□□□ -1.02
RPN11P43588 DMC1YER179W 1005 nt8.67□□□□□ -1.02
Retrieved 100 of 7,029 protein–RNA pairs in 23.4 ms