Protein–RNA interactions for Protein: P35542

SAA4, Serum amyloid A-4 protein, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAA4P35542 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SAA4P35542 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
SAA4P35542 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SAA4P35542 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SAA4P35542 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SAA4P35542 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
SAA4P35542 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SAA4P35542 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
SAA4P35542 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SAA4P35542 AP002414.2-202ENST00000590929 1450 ntBASIC20.45■□□□□ 0.86
SAA4P35542 CEP120-209ENST00000515110 606 ntTSL 3 BASIC20.45■□□□□ 0.86
SAA4P35542 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC20.45■□□□□ 0.86
SAA4P35542 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
SAA4P35542 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
SAA4P35542 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SAA4P35542 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SAA4P35542 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SAA4P35542 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SAA4P35542 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC20.44■□□□□ 0.86
SAA4P35542 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SAA4P35542 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SAA4P35542 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SAA4P35542 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SAA4P35542 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
SAA4P35542 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SAA4P35542 GPX1-201ENST00000419349 1106 ntBASIC20.43■□□□□ 0.86
SAA4P35542 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SAA4P35542 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
SAA4P35542 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC20.43■□□□□ 0.86
SAA4P35542 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SAA4P35542 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SAA4P35542 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SAA4P35542 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SAA4P35542 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
SAA4P35542 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SAA4P35542 BRD4-212ENST00000630599 726 ntTSL 2 BASIC20.42■□□□□ 0.86
SAA4P35542 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SAA4P35542 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC20.41■□□□□ 0.86
SAA4P35542 AC022413.1-201ENST00000624602 984 ntBASIC20.41■□□□□ 0.86
SAA4P35542 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SAA4P35542 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20.41■□□□□ 0.86
SAA4P35542 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SAA4P35542 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SAA4P35542 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC20.41■□□□□ 0.86
SAA4P35542 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SAA4P35542 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
SAA4P35542 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SAA4P35542 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC20.4■□□□□ 0.86
SAA4P35542 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SAA4P35542 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SAA4P35542 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC20.4■□□□□ 0.86
SAA4P35542 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SAA4P35542 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
SAA4P35542 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC20.4■□□□□ 0.86
SAA4P35542 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC20.39■□□□□ 0.85
SAA4P35542 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
SAA4P35542 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SAA4P35542 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC20.38■□□□□ 0.85
SAA4P35542 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SAA4P35542 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
SAA4P35542 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
SAA4P35542 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SAA4P35542 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SAA4P35542 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SAA4P35542 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC20.36■□□□□ 0.85
SAA4P35542 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC20.36■□□□□ 0.85
SAA4P35542 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SAA4P35542 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SAA4P35542 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC20.35■□□□□ 0.85
SAA4P35542 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SAA4P35542 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
SAA4P35542 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SAA4P35542 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SAA4P35542 AC126177.7-201ENST00000547904 679 ntBASIC20.34■□□□□ 0.85
SAA4P35542 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC20.34■□□□□ 0.85
SAA4P35542 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SAA4P35542 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SAA4P35542 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SAA4P35542 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SAA4P35542 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC20.33■□□□□ 0.85
SAA4P35542 AC060814.1-201ENST00000554326 538 ntBASIC20.33■□□□□ 0.85
SAA4P35542 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
SAA4P35542 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
SAA4P35542 PROC-203ENST00000409048 1586 ntTSL 5 BASIC20.33■□□□□ 0.84
SAA4P35542 RNF126P1-201ENST00000567452 1320 ntBASIC20.32■□□□□ 0.84
SAA4P35542 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SAA4P35542 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC20.32■□□□□ 0.84
SAA4P35542 RARRES2P2-201ENST00000394842 485 ntBASIC20.32■□□□□ 0.84
SAA4P35542 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC20.32■□□□□ 0.84
SAA4P35542 DRD5P2-201ENST00000421395 2012 ntBASIC20.32■□□□□ 0.84
SAA4P35542 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SAA4P35542 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SAA4P35542 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SAA4P35542 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
SAA4P35542 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
SAA4P35542 HES4-202ENST00000428771 1040 ntTSL 2 BASIC20.31■□□□□ 0.84
SAA4P35542 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC20.31■□□□□ 0.84
SAA4P35542 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SAA4P35542 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
SAA4P35542 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 12.4 ms