Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 REST-210ENST00000638187 1334 ntTSL 5 BASIC32.26■■■□□ 2.76
RFC4P35249 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC32.26■■■□□ 2.76
RFC4P35249 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.76
RFC4P35249 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC32.26■■■□□ 2.75
RFC4P35249 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
RFC4P35249 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
RFC4P35249 AC009831.1-201ENST00000580420 1582 ntBASIC32.25■■■□□ 2.75
RFC4P35249 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC32.25■■■□□ 2.75
RFC4P35249 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC32.25■■■□□ 2.75
RFC4P35249 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC32.25■■■□□ 2.75
RFC4P35249 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
RFC4P35249 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
RFC4P35249 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
RFC4P35249 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC32.24■■■□□ 2.75
RFC4P35249 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
RFC4P35249 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
RFC4P35249 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
RFC4P35249 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
RFC4P35249 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
RFC4P35249 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC32.21■■■□□ 2.75
RFC4P35249 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC32.21■■■□□ 2.75
RFC4P35249 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC32.2■■■□□ 2.75
RFC4P35249 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.74
RFC4P35249 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC32.19■■■□□ 2.74
RFC4P35249 AL035685.1-201ENST00000636663 812 ntBASIC32.19■■■□□ 2.74
RFC4P35249 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC32.19■■■□□ 2.74
RFC4P35249 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
RFC4P35249 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC32.18■■■□□ 2.74
RFC4P35249 SMPD5-203ENST00000639008 1464 ntBASIC32.16■■■□□ 2.74
RFC4P35249 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC32.16■■■□□ 2.74
RFC4P35249 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC32.16■■■□□ 2.74
RFC4P35249 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC32.16■■■□□ 2.74
RFC4P35249 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
RFC4P35249 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC32.15■■■□□ 2.74
RFC4P35249 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC32.14■■■□□ 2.74
RFC4P35249 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC32.14■■■□□ 2.74
RFC4P35249 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
RFC4P35249 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC32.13■■■□□ 2.73
RFC4P35249 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
RFC4P35249 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC32.13■■■□□ 2.73
RFC4P35249 AL451085.2-201ENST00000605085 799 ntBASIC32.13■■■□□ 2.73
RFC4P35249 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC32.12■■■□□ 2.73
RFC4P35249 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC32.11■■■□□ 2.73
RFC4P35249 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC32.11■■■□□ 2.73
RFC4P35249 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
RFC4P35249 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
RFC4P35249 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC32.11■■■□□ 2.73
RFC4P35249 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC32.11■■■□□ 2.73
RFC4P35249 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC32.11■■■□□ 2.73
RFC4P35249 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC32.1■■■□□ 2.73
RFC4P35249 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
RFC4P35249 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
RFC4P35249 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
RFC4P35249 AC026202.3-201ENST00000600805 1127 ntBASIC32.09■■■□□ 2.73
RFC4P35249 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC32.07■■■□□ 2.72
RFC4P35249 AL359258.2-201ENST00000564063 1566 ntBASIC32.07■■■□□ 2.72
RFC4P35249 TRIR-205ENST00000592273 783 ntTSL 3 BASIC32.06■■■□□ 2.72
RFC4P35249 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC32.06■■■□□ 2.72
RFC4P35249 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC32.05■■■□□ 2.72
RFC4P35249 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC32.05■■■□□ 2.72
RFC4P35249 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC32.04■■■□□ 2.72
RFC4P35249 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC32.04■■■□□ 2.72
RFC4P35249 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC32.03■■■□□ 2.72
RFC4P35249 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC32.03■■■□□ 2.72
RFC4P35249 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC32.03■■■□□ 2.72
RFC4P35249 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC32.03■■■□□ 2.72
RFC4P35249 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
RFC4P35249 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
RFC4P35249 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
RFC4P35249 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
RFC4P35249 BHLHE23-202ENST00000612929 1109 ntBASIC32.02■■■□□ 2.72
RFC4P35249 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC32.02■■■□□ 2.72
RFC4P35249 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC32.02■■■□□ 2.72
RFC4P35249 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC32.01■■■□□ 2.72
RFC4P35249 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC32.01■■■□□ 2.72
RFC4P35249 DUX4L9-201ENST00000449051 1259 ntBASIC32.01■■■□□ 2.71
RFC4P35249 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC32.01■■■□□ 2.71
RFC4P35249 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC32.01■■■□□ 2.71
RFC4P35249 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC32.01■■■□□ 2.71
RFC4P35249 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC32■■■□□ 2.71
RFC4P35249 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC32■■■□□ 2.71
RFC4P35249 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
RFC4P35249 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
RFC4P35249 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC32■■■□□ 2.71
RFC4P35249 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC31.99■■■□□ 2.71
RFC4P35249 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC31.99■■■□□ 2.71
RFC4P35249 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC31.99■■■□□ 2.71
RFC4P35249 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC31.99■■■□□ 2.71
RFC4P35249 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC31.99■■■□□ 2.71
RFC4P35249 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
RFC4P35249 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
RFC4P35249 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC31.98■■■□□ 2.71
RFC4P35249 AC025884.2-201ENST00000553429 711 ntBASIC31.98■■■□□ 2.71
RFC4P35249 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC31.98■■■□□ 2.71
RFC4P35249 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
RFC4P35249 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC31.97■■■□□ 2.71
RFC4P35249 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC31.97■■■□□ 2.71
RFC4P35249 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC31.97■■■□□ 2.71
RFC4P35249 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
RFC4P35249 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms