Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
CD40P25942 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CD40P25942 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CD40P25942 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CD40P25942 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC21.83■■□□□ 1.09
CD40P25942 RNF126P1-201ENST00000567452 1320 ntBASIC21.83■■□□□ 1.09
CD40P25942 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC21.83■■□□□ 1.09
CD40P25942 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC21.83■■□□□ 1.09
CD40P25942 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
CD40P25942 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
CD40P25942 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CD40P25942 RARRES2P2-201ENST00000394842 485 ntBASIC21.82■■□□□ 1.08
CD40P25942 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CD40P25942 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CD40P25942 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CD40P25942 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CD40P25942 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC21.81■■□□□ 1.08
CD40P25942 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CD40P25942 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CD40P25942 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
CD40P25942 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CD40P25942 AP002414.2-202ENST00000590929 1450 ntBASIC21.8■■□□□ 1.08
CD40P25942 HES4-202ENST00000428771 1040 ntTSL 2 BASIC21.8■■□□□ 1.08
CD40P25942 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CD40P25942 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CD40P25942 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
CD40P25942 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CD40P25942 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC21.78■■□□□ 1.08
CD40P25942 AC060814.1-201ENST00000554326 538 ntBASIC21.78■■□□□ 1.08
CD40P25942 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC21.78■■□□□ 1.08
CD40P25942 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC21.77■■□□□ 1.08
CD40P25942 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
CD40P25942 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CD40P25942 AC126177.7-201ENST00000547904 679 ntBASIC21.77■■□□□ 1.08
CD40P25942 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC21.77■■□□□ 1.08
CD40P25942 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC21.77■■□□□ 1.08
CD40P25942 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC21.77■■□□□ 1.07
CD40P25942 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CD40P25942 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CD40P25942 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
CD40P25942 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CD40P25942 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
CD40P25942 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CD40P25942 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC21.75■■□□□ 1.07
CD40P25942 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
CD40P25942 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC21.75■■□□□ 1.07
CD40P25942 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CD40P25942 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CD40P25942 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CD40P25942 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CD40P25942 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CD40P25942 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC21.74■■□□□ 1.07
CD40P25942 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CD40P25942 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CD40P25942 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC21.72■■□□□ 1.07
CD40P25942 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CD40P25942 MED25-210ENST00000612854 801 ntTSL 5 BASIC21.72■■□□□ 1.07
CD40P25942 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CD40P25942 MED25-214ENST00000622402 642 ntTSL 5 BASIC21.72■■□□□ 1.07
CD40P25942 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CD40P25942 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CD40P25942 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CD40P25942 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CD40P25942 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CD40P25942 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
CD40P25942 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
CD40P25942 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC21.71■■□□□ 1.07
CD40P25942 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
CD40P25942 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CD40P25942 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CD40P25942 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CD40P25942 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CD40P25942 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC21.7■■□□□ 1.06
CD40P25942 ABHD17AP5-201ENST00000580133 923 ntBASIC21.7■■□□□ 1.06
CD40P25942 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC21.7■■□□□ 1.06
CD40P25942 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CD40P25942 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
CD40P25942 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CD40P25942 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC21.69■■□□□ 1.06
CD40P25942 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CD40P25942 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CD40P25942 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC21.69■■□□□ 1.06
CD40P25942 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CD40P25942 AC092296.2-201ENST00000589470 999 ntBASIC21.68■■□□□ 1.06
CD40P25942 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CD40P25942 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CD40P25942 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CD40P25942 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CD40P25942 AC139426.1-201ENST00000568218 2529 ntBASIC21.67■■□□□ 1.06
CD40P25942 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CD40P25942 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC21.66■■□□□ 1.06
CD40P25942 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CD40P25942 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CD40P25942 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CD40P25942 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CD40P25942 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CD40P25942 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CD40P25942 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CD40P25942 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC21.64■■□□□ 1.06
CD40P25942 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 9.7 ms