Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 MOB2-207ENST00000614710 705 ntTSL 5 BASIC27.79■■■□□ 2.04
CHRNA1P02708 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
CHRNA1P02708 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
CHRNA1P02708 AC126177.7-201ENST00000547904 679 ntBASIC27.78■■■□□ 2.04
CHRNA1P02708 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
CHRNA1P02708 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
CHRNA1P02708 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC27.77■■■□□ 2.04
CHRNA1P02708 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
CHRNA1P02708 AL157400.5-201ENST00000507624 621 ntBASIC27.77■■■□□ 2.04
CHRNA1P02708 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC27.77■■■□□ 2.04
CHRNA1P02708 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC27.77■■■□□ 2.04
CHRNA1P02708 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC27.76■■■□□ 2.03
CHRNA1P02708 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
CHRNA1P02708 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
CHRNA1P02708 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC27.76■■■□□ 2.03
CHRNA1P02708 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC27.76■■■□□ 2.03
CHRNA1P02708 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
CHRNA1P02708 KRT18P60-201ENST00000312876 1297 ntBASIC27.75■■■□□ 2.03
CHRNA1P02708 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
CHRNA1P02708 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC27.75■■■□□ 2.03
CHRNA1P02708 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
CHRNA1P02708 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
CHRNA1P02708 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC27.74■■■□□ 2.03
CHRNA1P02708 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
CHRNA1P02708 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
CHRNA1P02708 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
CHRNA1P02708 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC27.72■■■□□ 2.03
CHRNA1P02708 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
CHRNA1P02708 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
CHRNA1P02708 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC27.72■■■□□ 2.03
CHRNA1P02708 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC27.71■■■□□ 2.03
CHRNA1P02708 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC27.7■■■□□ 2.02
CHRNA1P02708 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
CHRNA1P02708 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC27.7■■■□□ 2.02
CHRNA1P02708 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
CHRNA1P02708 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC27.69■■■□□ 2.02
CHRNA1P02708 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
CHRNA1P02708 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC27.69■■■□□ 2.02
CHRNA1P02708 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
CHRNA1P02708 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC27.69■■■□□ 2.02
CHRNA1P02708 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC27.69■■■□□ 2.02
CHRNA1P02708 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC27.68■■■□□ 2.02
CHRNA1P02708 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC27.67■■■□□ 2.02
CHRNA1P02708 AC004987.1-201ENST00000428627 508 ntBASIC27.67■■■□□ 2.02
CHRNA1P02708 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
CHRNA1P02708 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC27.67■■■□□ 2.02
CHRNA1P02708 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC27.67■■■□□ 2.02
CHRNA1P02708 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
CHRNA1P02708 AL139393.2-201ENST00000608721 2025 ntBASIC27.67■■■□□ 2.02
CHRNA1P02708 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC27.66■■■□□ 2.02
CHRNA1P02708 GFER-205ENST00000569451 517 ntTSL 5 BASIC27.66■■■□□ 2.02
CHRNA1P02708 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC27.66■■■□□ 2.02
CHRNA1P02708 TSPY13P-201ENST00000338964 914 ntBASIC27.65■■■□□ 2.02
CHRNA1P02708 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
CHRNA1P02708 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC27.65■■■□□ 2.02
CHRNA1P02708 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
CHRNA1P02708 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC27.65■■■□□ 2.02
CHRNA1P02708 ATP5G2P3-201ENST00000429083 425 ntBASIC27.64■■■□□ 2.02
CHRNA1P02708 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC27.64■■■□□ 2.02
CHRNA1P02708 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC27.63■■■□□ 2.01
CHRNA1P02708 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
CHRNA1P02708 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
CHRNA1P02708 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC27.63■■■□□ 2.01
CHRNA1P02708 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC27.63■■■□□ 2.01
CHRNA1P02708 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC27.62■■■□□ 2.01
CHRNA1P02708 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
CHRNA1P02708 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC27.62■■■□□ 2.01
CHRNA1P02708 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC27.62■■■□□ 2.01
CHRNA1P02708 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC27.62■■■□□ 2.01
CHRNA1P02708 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC27.62■■■□□ 2.01
CHRNA1P02708 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
CHRNA1P02708 AC007029.1-201ENST00000604183 313 ntBASIC27.62■■■□□ 2.01
CHRNA1P02708 AL359258.2-201ENST00000564063 1566 ntBASIC27.61■■■□□ 2.01
CHRNA1P02708 ABCB10P3-201ENST00000561950 2166 ntBASIC27.61■■■□□ 2.01
CHRNA1P02708 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
CHRNA1P02708 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC27.61■■■□□ 2.01
CHRNA1P02708 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
CHRNA1P02708 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
CHRNA1P02708 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC27.6■■■□□ 2.01
CHRNA1P02708 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC27.6■■■□□ 2.01
CHRNA1P02708 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC27.6■■■□□ 2.01
CHRNA1P02708 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC27.6■■■□□ 2.01
CHRNA1P02708 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC27.59■■■□□ 2.01
CHRNA1P02708 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC27.58■■■□□ 2.01
CHRNA1P02708 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2
CHRNA1P02708 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC27.57■■■□□ 2
CHRNA1P02708 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC27.57■■■□□ 2
CHRNA1P02708 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
CHRNA1P02708 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC27.57■■■□□ 2
CHRNA1P02708 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC27.57■■■□□ 2
CHRNA1P02708 GUK1-208ENST00000366728 842 ntTSL 2 BASIC27.56■■■□□ 2
CHRNA1P02708 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC27.56■■■□□ 2
CHRNA1P02708 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC27.56■■■□□ 2
CHRNA1P02708 REST-210ENST00000638187 1334 ntTSL 5 BASIC27.56■■■□□ 2
CHRNA1P02708 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC27.56■■■□□ 2
CHRNA1P02708 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
CHRNA1P02708 SMPD5-203ENST00000639008 1464 ntBASIC27.56■■■□□ 2
CHRNA1P02708 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
CHRNA1P02708 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC27.55■■■□□ 2
CHRNA1P02708 AC009831.1-201ENST00000580420 1582 ntBASIC27.55■■■□□ 2
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms