Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC22.5■■□□□ 1.19
CLDN1O95832 AC010864.1-201ENST00000609407 1511 ntBASIC22.5■■□□□ 1.19
CLDN1O95832 AC110285.7-201ENST00000624417 1536 ntBASIC22.5■■□□□ 1.19
CLDN1O95832 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
CLDN1O95832 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CLDN1O95832 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CLDN1O95832 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CLDN1O95832 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC22.48■■□□□ 1.19
CLDN1O95832 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CLDN1O95832 AC131212.1-201ENST00000613771 668 ntBASIC22.48■■□□□ 1.19
CLDN1O95832 AC135983.2-203ENST00000454486 1613 ntBASIC22.48■■□□□ 1.19
CLDN1O95832 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CLDN1O95832 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CLDN1O95832 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CLDN1O95832 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC22.47■■□□□ 1.19
CLDN1O95832 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CLDN1O95832 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CLDN1O95832 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC22.46■■□□□ 1.19
CLDN1O95832 AL592293.1-201ENST00000502889 1188 ntBASIC22.46■■□□□ 1.19
CLDN1O95832 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CLDN1O95832 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
CLDN1O95832 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC22.45■■□□□ 1.19
CLDN1O95832 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CLDN1O95832 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC22.45■■□□□ 1.18
CLDN1O95832 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CLDN1O95832 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
CLDN1O95832 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
CLDN1O95832 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC22.44■■□□□ 1.18
CLDN1O95832 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
CLDN1O95832 MOB2-207ENST00000614710 705 ntTSL 5 BASIC22.44■■□□□ 1.18
CLDN1O95832 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC22.43■■□□□ 1.18
CLDN1O95832 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
CLDN1O95832 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CLDN1O95832 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CLDN1O95832 AL161658.1-201ENST00000623641 1967 ntBASIC22.42■■□□□ 1.18
CLDN1O95832 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CLDN1O95832 RPS2-210ENST00000530225 765 ntTSL 2 BASIC22.42■■□□□ 1.18
CLDN1O95832 AC009831.1-201ENST00000580420 1582 ntBASIC22.42■■□□□ 1.18
CLDN1O95832 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CLDN1O95832 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CLDN1O95832 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC22.41■■□□□ 1.18
CLDN1O95832 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
CLDN1O95832 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC22.41■■□□□ 1.18
CLDN1O95832 AC133552.2-201ENST00000619106 1032 ntBASIC22.41■■□□□ 1.18
CLDN1O95832 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
CLDN1O95832 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CLDN1O95832 AC007029.1-201ENST00000604183 313 ntBASIC22.4■■□□□ 1.18
CLDN1O95832 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC22.4■■□□□ 1.18
CLDN1O95832 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
CLDN1O95832 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
CLDN1O95832 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.18
CLDN1O95832 THA1P-201ENST00000590384 1145 ntBASIC22.39■■□□□ 1.17
CLDN1O95832 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC22.39■■□□□ 1.17
CLDN1O95832 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.17
CLDN1O95832 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.17
CLDN1O95832 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CLDN1O95832 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
CLDN1O95832 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CLDN1O95832 MIR935-201ENST00000401179 91 ntBASIC22.38■■□□□ 1.17
CLDN1O95832 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CLDN1O95832 AC009299.2-201ENST00000482477 511 ntBASIC22.38■■□□□ 1.17
CLDN1O95832 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CLDN1O95832 AL157400.5-201ENST00000507624 621 ntBASIC22.38■■□□□ 1.17
CLDN1O95832 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CLDN1O95832 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
CLDN1O95832 AC127502.1-201ENST00000399971 1502 ntBASIC22.37■■□□□ 1.17
CLDN1O95832 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CLDN1O95832 AC126177.7-201ENST00000547904 679 ntBASIC22.37■■□□□ 1.17
CLDN1O95832 MED25-210ENST00000612854 801 ntTSL 5 BASIC22.37■■□□□ 1.17
CLDN1O95832 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CLDN1O95832 MED25-214ENST00000622402 642 ntTSL 5 BASIC22.37■■□□□ 1.17
CLDN1O95832 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CLDN1O95832 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CLDN1O95832 KRT8P33-201ENST00000508125 1423 ntBASIC22.35■■□□□ 1.17
CLDN1O95832 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CLDN1O95832 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
CLDN1O95832 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CLDN1O95832 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
CLDN1O95832 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CLDN1O95832 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CLDN1O95832 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
CLDN1O95832 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CLDN1O95832 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CLDN1O95832 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC22.34■■□□□ 1.17
CLDN1O95832 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CLDN1O95832 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC22.34■■□□□ 1.17
CLDN1O95832 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC22.33■■□□□ 1.17
CLDN1O95832 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.17
CLDN1O95832 AC010980.1-201ENST00000587192 1142 ntBASIC22.33■■□□□ 1.17
CLDN1O95832 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC22.32■■□□□ 1.16
CLDN1O95832 HES6-204ENST00000409182 863 ntTSL 2 BASIC22.32■■□□□ 1.16
CLDN1O95832 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC22.32■■□□□ 1.16
CLDN1O95832 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
CLDN1O95832 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC22.31■■□□□ 1.16
CLDN1O95832 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC22.31■■□□□ 1.16
CLDN1O95832 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CLDN1O95832 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CLDN1O95832 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CLDN1O95832 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC22.31■■□□□ 1.16
CLDN1O95832 RP9P-202ENST00000450133 1212 ntBASIC22.31■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms