Protein–RNA interactions for Protein: O94993

SOX30, Transcription factor SOX-30, humanhuman

Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX30O94993 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
SOX30O94993 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SOX30O94993 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
SOX30O94993 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
SOX30O94993 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC23.34■■□□□ 1.33
SOX30O94993 CHML-204ENST00000638121 920 ntTSL 2 BASIC23.34■■□□□ 1.33
SOX30O94993 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
SOX30O94993 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SOX30O94993 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
SOX30O94993 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SOX30O94993 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
SOX30O94993 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SOX30O94993 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SOX30O94993 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SOX30O94993 RPS2-210ENST00000530225 765 ntTSL 2 BASIC23.33■■□□□ 1.33
SOX30O94993 DUX4L13-201ENST00000554103 1267 ntBASIC23.33■■□□□ 1.33
SOX30O94993 DUX4L15-201ENST00000611059 1267 ntBASIC23.33■■□□□ 1.33
SOX30O94993 DUX4L23-201ENST00000615195 1269 ntBASIC23.33■■□□□ 1.33
SOX30O94993 DUX4L24-201ENST00000617576 1269 ntBASIC23.33■■□□□ 1.33
SOX30O94993 DUX4L22-201ENST00000618238 1269 ntBASIC23.33■■□□□ 1.33
SOX30O94993 DUX4L20-201ENST00000619712 1269 ntBASIC23.33■■□□□ 1.33
SOX30O94993 DUX4L21-201ENST00000622058 1269 ntBASIC23.33■■□□□ 1.33
SOX30O94993 DUX4L10-201ENST00000622460 1267 ntBASIC23.33■■□□□ 1.33
SOX30O94993 DUX4L25-201ENST00000624915 1269 ntBASIC23.33■■□□□ 1.33
SOX30O94993 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
SOX30O94993 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SOX30O94993 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
SOX30O94993 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SOX30O94993 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
SOX30O94993 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SOX30O94993 MIR7108-201ENST00000614319 87 ntBASIC23.31■■□□□ 1.32
SOX30O94993 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SOX30O94993 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
SOX30O94993 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
SOX30O94993 AGPS-202ENST00000409888 815 ntTSL 4 BASIC23.3■■□□□ 1.32
SOX30O94993 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
SOX30O94993 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
SOX30O94993 ZNRF2P2-203ENST00000454624 420 ntBASIC23.29■■□□□ 1.32
SOX30O94993 AC008813.1-201ENST00000536597 885 ntBASIC23.29■■□□□ 1.32
SOX30O94993 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
SOX30O94993 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
SOX30O94993 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
SOX30O94993 DUX4L11-201ENST00000611504 1267 ntBASIC23.28■■□□□ 1.32
SOX30O94993 DUX4L12-201ENST00000614593 1267 ntBASIC23.28■■□□□ 1.32
SOX30O94993 DUX4L14-201ENST00000621227 1267 ntBASIC23.28■■□□□ 1.32
SOX30O94993 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
SOX30O94993 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
SOX30O94993 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SOX30O94993 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
SOX30O94993 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SOX30O94993 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SOX30O94993 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC23.27■■□□□ 1.32
SOX30O94993 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
SOX30O94993 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
SOX30O94993 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
SOX30O94993 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SOX30O94993 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
SOX30O94993 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC23.25■■□□□ 1.31
SOX30O94993 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
SOX30O94993 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
SOX30O94993 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SOX30O94993 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC23.24■■□□□ 1.31
SOX30O94993 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC23.24■■□□□ 1.31
SOX30O94993 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC23.24■■□□□ 1.31
SOX30O94993 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SOX30O94993 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SOX30O94993 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC23.23■■□□□ 1.31
SOX30O94993 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SOX30O94993 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
SOX30O94993 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC23.23■■□□□ 1.31
SOX30O94993 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
SOX30O94993 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SOX30O94993 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
SOX30O94993 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SOX30O94993 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC23.21■■□□□ 1.31
SOX30O94993 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
SOX30O94993 AL121749.1-202ENST00000609313 2153 ntBASIC23.2■■□□□ 1.3
SOX30O94993 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
SOX30O94993 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SOX30O94993 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SOX30O94993 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
SOX30O94993 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC23.19■■□□□ 1.3
SOX30O94993 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
SOX30O94993 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SOX30O94993 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
SOX30O94993 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
SOX30O94993 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SOX30O94993 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC23.17■■□□□ 1.3
SOX30O94993 CHST11-202ENST00000546689 756 ntTSL 2 BASIC23.17■■□□□ 1.3
SOX30O94993 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SOX30O94993 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
SOX30O94993 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SOX30O94993 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SOX30O94993 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
SOX30O94993 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC23.16■■□□□ 1.3
SOX30O94993 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
SOX30O94993 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SOX30O94993 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC23.15■■□□□ 1.3
SOX30O94993 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
SOX30O94993 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms