Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC39.96■■■■□ 3.99
PCF11O94913 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC39.96■■■■□ 3.99
PCF11O94913 HES4-202ENST00000428771 1040 ntTSL 2 BASIC39.96■■■■□ 3.99
PCF11O94913 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC39.95■■■■□ 3.99
PCF11O94913 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC39.94■■■■□ 3.98
PCF11O94913 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC39.93■■■■□ 3.98
PCF11O94913 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC39.93■■■■□ 3.98
PCF11O94913 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC39.92■■■■□ 3.98
PCF11O94913 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC39.91■■■■□ 3.98
PCF11O94913 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC39.91■■■■□ 3.98
PCF11O94913 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC39.9■■■■□ 3.98
PCF11O94913 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC39.9■■■■□ 3.98
PCF11O94913 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC39.9■■■■□ 3.98
PCF11O94913 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC39.9■■■■□ 3.98
PCF11O94913 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC39.89■■■■□ 3.98
PCF11O94913 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC39.89■■■■□ 3.98
PCF11O94913 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC39.89■■■■□ 3.98
PCF11O94913 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC39.89■■■■□ 3.98
PCF11O94913 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC39.88■■■■□ 3.97
PCF11O94913 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC39.88■■■■□ 3.97
PCF11O94913 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC39.88■■■■□ 3.97
PCF11O94913 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC39.88■■■■□ 3.97
PCF11O94913 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC39.88■■■■□ 3.97
PCF11O94913 AL139393.2-201ENST00000608721 2025 ntBASIC39.87■■■■□ 3.97
PCF11O94913 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC39.87■■■■□ 3.97
PCF11O94913 HYI-213ENST00000583037 1322 ntTSL 5 BASIC39.85■■■■□ 3.97
PCF11O94913 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC39.85■■■■□ 3.97
PCF11O94913 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC39.84■■■■□ 3.97
PCF11O94913 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC39.84■■■■□ 3.97
PCF11O94913 U85056.1-201ENST00000616429 682 ntBASIC39.84■■■■□ 3.97
PCF11O94913 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC39.84■■■■□ 3.97
PCF11O94913 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC39.83■■■■□ 3.97
PCF11O94913 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC39.82■■■■□ 3.97
PCF11O94913 AC018358.1-201ENST00000631079 1402 ntBASIC39.82■■■■□ 3.97
PCF11O94913 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC39.82■■■■□ 3.97
PCF11O94913 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC39.81■■■■□ 3.96
PCF11O94913 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC39.8■■■■□ 3.96
PCF11O94913 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC39.8■■■■□ 3.96
PCF11O94913 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC39.8■■■■□ 3.96
PCF11O94913 AC019069.1-201ENST00000610008 1333 ntBASIC39.8■■■■□ 3.96
PCF11O94913 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC39.79■■■■□ 3.96
PCF11O94913 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC39.79■■■■□ 3.96
PCF11O94913 ABCB10P3-201ENST00000561950 2166 ntBASIC39.79■■■■□ 3.96
PCF11O94913 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC39.79■■■■□ 3.96
PCF11O94913 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC39.78■■■■□ 3.96
PCF11O94913 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC39.78■■■■□ 3.96
PCF11O94913 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC39.76■■■■□ 3.96
PCF11O94913 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC39.76■■■■□ 3.96
PCF11O94913 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC39.76■■■■□ 3.95
PCF11O94913 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC39.75■■■■□ 3.95
PCF11O94913 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC39.74■■■■□ 3.95
PCF11O94913 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC39.74■■■■□ 3.95
PCF11O94913 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC39.73■■■■□ 3.95
PCF11O94913 KRT18P60-201ENST00000312876 1297 ntBASIC39.73■■■■□ 3.95
PCF11O94913 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC39.73■■■■□ 3.95
PCF11O94913 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC39.73■■■■□ 3.95
PCF11O94913 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC39.73■■■■□ 3.95
PCF11O94913 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC39.72■■■■□ 3.95
PCF11O94913 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC39.72■■■■□ 3.95
PCF11O94913 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC39.71■■■■□ 3.95
PCF11O94913 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC39.71■■■■□ 3.95
PCF11O94913 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC39.7■■■■□ 3.95
PCF11O94913 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC39.7■■■■□ 3.95
PCF11O94913 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC39.7■■■■□ 3.95
PCF11O94913 AC126177.7-201ENST00000547904 679 ntBASIC39.7■■■■□ 3.95
PCF11O94913 GFER-205ENST00000569451 517 ntTSL 5 BASIC39.69■■■■□ 3.94
PCF11O94913 ST7-205ENST00000393446 2114 ntTSL 5 BASIC39.68■■■■□ 3.94
PCF11O94913 ECEL1P2-201ENST00000461596 1295 ntBASIC39.68■■■■□ 3.94
PCF11O94913 ABCB10P1-201ENST00000614297 2181 ntBASIC39.68■■■■□ 3.94
PCF11O94913 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC39.67■■■■□ 3.94
PCF11O94913 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC39.67■■■■□ 3.94
PCF11O94913 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC39.66■■■■□ 3.94
PCF11O94913 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC39.66■■■■□ 3.94
PCF11O94913 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC39.66■■■■□ 3.94
PCF11O94913 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC39.65■■■■□ 3.94
PCF11O94913 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC39.64■■■■□ 3.94
PCF11O94913 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC39.64■■■■□ 3.94
PCF11O94913 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC39.64■■■■□ 3.94
PCF11O94913 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC39.64■■■■□ 3.94
PCF11O94913 AC007029.1-201ENST00000604183 313 ntBASIC39.64■■■■□ 3.94
PCF11O94913 AP002414.2-202ENST00000590929 1450 ntBASIC39.63■■■■□ 3.94
PCF11O94913 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC39.63■■■■□ 3.94
PCF11O94913 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC39.63■■■■□ 3.94
PCF11O94913 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC39.63■■■■□ 3.93
PCF11O94913 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC39.63■■■■□ 3.93
PCF11O94913 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC39.62■■■■□ 3.93
PCF11O94913 ST7-202ENST00000323984 2142 ntTSL 5 BASIC39.62■■■■□ 3.93
PCF11O94913 ST7-207ENST00000393449 2127 ntTSL 5 BASIC39.62■■■■□ 3.93
PCF11O94913 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC39.62■■■■□ 3.93
PCF11O94913 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC39.62■■■■□ 3.93
PCF11O94913 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC39.62■■■■□ 3.93
PCF11O94913 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC39.62■■■■□ 3.93
PCF11O94913 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC39.61■■■■□ 3.93
PCF11O94913 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC39.61■■■■□ 3.93
PCF11O94913 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC39.6■■■■□ 3.93
PCF11O94913 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC39.6■■■■□ 3.93
PCF11O94913 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC39.59■■■■□ 3.93
PCF11O94913 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC39.59■■■■□ 3.93
PCF11O94913 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC39.59■■■■□ 3.93
PCF11O94913 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC39.59■■■■□ 3.93
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms